Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2174 ATGGCGGTGGAAGAATTCAAGTGCTTTATGAGGAGAAAGCGCAAAAGAGGGTCTGGAAAAATTAAGCTTTCCGTCAATGAGAGAGTAGAGTTCCTGATTCCAATATGTTTCCACGATAGTTGTCAGTATAGTTATTCGCCATTGTCCATTCCCCAGCTCCATGGACAATGGGGCAACAAAATGGTTGTTGCATTGCCAATTTCATTTGGCTCTGCTGTGGCGAGTGCTAAGCTCCATGGACAATGGGGCAACAAAATGGTTGTTGCATTGCCAATTTCCTTTGGCTCAGCTGTGGCGTGTGGCAATGAAATGGTTGTTGCATTGCCAATTTCATTTGGCTCAGCTGTGGCGGGGGCCAACAAAATGGTTGTTGCATTGCCAATTTTATTTGGCTCAGCTGTGGCACGCGATGCACCATTGTCCGTGGTGAGGAGTGAGGAAGAGGGCTTTCTGGGCTCATGGCACCCAGGGACTGTTATCCAATGCGGGAAGCAGAAGCGTTATGTCAAATATGACAATCTCTTAGATGATAATAATGGATCAAATCATCTTGTTGACGTGGTGGTTGTTCCAGCAGTTTTGGATGGTGCCAGTTCTACAATTTGCAATGAACGTGGATTTATTAGACCATTTCCTCCTATGATAGAGTTTGGGATATGGGACCTTCCCTTTGGTCTGTGTGTTGATGTGAATTTTCAAGAAGCCTGGTGGGAAGGCGTTATCTTTGATCACTGTGATGGGATGGAGGAGAGGTGCATATTTTTCCCAGATTTGGGAGATGAAATGAAGTTTGAAATTGGCCAGTTGCGTATTACTCATGACTGGAATGAAGTTACAGAGGATTGGGAGCGACGGGGGATGTGGATATTTCTTGAATTGGTTGAGGAGTGTGAACAGGACACTTATGTTCCAGTTTCAATAAAGCAAATCTGGTATGACGTACGGGCTAAAAAAGATTTCGATAAGATTAGGGACTGGACATGTAATGTGAAAGACTTATGGAAAGTTCTGGTATTTGAGGTTGTTAATGACTACTTCACACTTACACTAAAAGAACTTTCCAAAGGTTTATTGACAGAAGCACCAGAACTAGAGTCAGGTGAACCTGCTGTTAATGTTCACTTGAATCAGGAAGGTGATACTGCCAACTTTCATTCTATTTTACATTCTGGCAAACaattaaatagaaaatcaaATGTTCATTATGATGATGGTCATAGTAATGTATTTGGCTCTGATGTTATATTGGCTGAGAGCCCTATGGAAAAAGGTGACATGTCAAACTTCTTGGATAATGATCAAAACAGTGGCAGCATCATTCTTGTCCAGGAGAAATATGATACAGACCTGGCAGGGGATGGAGCATCAAAGATGCCTATTCCTGAGACTGAAGTCTTGGTGCAGAAGGAATCTATATCTCCAGTTGAAGAGGTCTTTCCAGACATTGCAGAAGGAATTTCCAGATCTGATACTGATGCTGCTGGTGAAGTAGACTCCAGTGCTAGCTGTTATGAGAAAAATAGGCGACAGGCAACTCGAATTAGGTCCACATACTGGAAACCTCTGAATCTTTCTGGAGTCAAATCTTGTCCTAACGCTATTAATCAATATGCACTTGCATCTAAAAGGAAGACCAGGGTGAAATTGAAGACAAAAGTCAGAAAACATCTTGCGTATCTTGGATGGAAAATCGAGTGGACGGAATGTGGATCCTCACGGCGATACAGGTACATCTCACCTGATAAACAGGGCAAACAGGTTTACATGTCACTCTGTCAAGTTTGTGAAcatatgaaaaatgaaaataaggcAGACTCGTTGTTGTCCAAAGATGATCAGGGAAAGTTGAATCCTACAGTTGACAGTACTATTTCACATCCTGCAAATTCTCCACCTCCTCCTTCTATTGAAGATGTAGAATCCGAATTTTGTCCTGAAGCTGTTTTGAAATATTACTTACTTGCATTTGAGAAGGACCCCAAGGCTgataaaaaaagtatgatacaAAAAGCAAGAAATCACCTGTTAGCAGCAGGATGGAATTGTGACCACCCAGTTGAAAGAGGAAGGGGTTTGATCTACAAGTCGCCAAAAAATAAGTGTTTTGGTTCACTTCGAGTAGCATGCAGAGTATATATTGAAGAATGTCTTCCTCAGTGGATTGGTTCTAGCATGCTACCTCTAGATGTTTCAGAAATAAATGAGGAGAATATAAGTCAGGGTGATATGAATGAATTAGTACTCCGTGTATCCCAATTGCTTCAAGAGGAACCTGAATTACGTAATGTAAATAGTTTTCCGGCAAGCAGATCAACTCGGAATTGCAAGCTCAAACGCTCGAGGAATTTAAAATGCAGGCTACCTAAAATCCAGAGAAAAGGATTACCTATTCGGTTATTACGATCAAGCAAAAGGGTGCAAAAGGTGTGTGCTCCTAGTCCATCACACAAAAAGCCTCAAAATGTCCTGTCTTGGTTAATAGACAGCAATGTGGTGTTACCAAGGTCTAAGGTCCATTACCGGGCAAGAGGCAAATGCCATCCTATGGCTGAGGGGCGAATAACTCGTGATGGAATCAAATGTAGCTGTTGCCAGAATGTATATAGTATTGGTGGCTTCGAACATCATGCTAATGGTCACAATAATCACAGACCTGCTGCTGCTAGTATCTTTCTGGAAAATGGCAAGTCACTCCTAGATTGCCAGATACAAATAATGCATGATGATAGGACAAGGGAAACTACCAAAAAACCATTGAAGGGTGTATATCGAGCTGAGAATGACTGCATTTGTTCTGTTTGTCACTATGGCGGTGATCTAATTTTATGTGATCAATGTCCATCCTCTTTTCATATGAGATGTCTAGGTTTGGAGGACATCCCTGAAGGTGACTGGTTTTGTCCATCGTGTCGTTGTGGGATTTGTGGCCTAAGTAAAATTGAAGGGGCTGAGGATGGAAAGTTCCTTACTTGCTTTCAGTGTGAACATAAGTATCATGCCAAGTGCTTGAGCAGAAGTTCTGTTTACAAGTCAGGAAAATCTCCAAAAAGGCGGTTTTGTGGAAAAAGCTGTGAAAagATATATGAAGGCCTTGTTAAATTGTTAGGACAACCTGTTCTAGTGGGTATGAACAATTTAAGTTGGACATTGCTGAAGGGTGGCATCCCTGAGGAGTGTGATCTTGGCAGCACTAAATACGACTTCATGGTAGAGAGTTACAGCAAACTCAATGTTGCTCTTTCAGTGATGCATGAATGTTTTGAGCCTTTACAGGAAGTTCACTCTGGTAGAGATCTCGTGGAAGATGTTCTTTTTAGCAGAAGgtCAAAGCTTAATAGATTGAACTTCCAGGGCTTCTACACGGTTCTTCTggagaaaaatgaagaattgATAAGTGTGGCAACCGTTAGGGTCTATGGAGATAAGGTAGCAGAAATACCTCTTGTGGGTACCAGATTTCAGTATCGGCGACTTGGAATGTGTCGTGTTTTAATGGATGAGCTTGAAAAGAGGCTAATGGAACTCGGAGTGGAGAGGCTAGTTTTGCCTGCTGTTCCCAGTGTGCTAGAAACGTGGACCACTTCTTTTGGCTTTGCAAAGATGACAAGTTCTGAGAGATCACAGTTTATGGATTATACTTTCCTTGACTTCCAGGATACTGTCATGTGCCAGAAGCTTTTGACCAAGACTCGTCTAGATTTAGTTCGGTCAACAGAGAACCAGCCAAAACCACAAGATGTTGTATCTGCAAGTGGCGGTACTCTTTTTGATCAGTCCAGCTCGGCATCTGAAGTGTATCAAGCAGAAGGAATTGACAAAAGTGGGATGCTTGATTTACAAATGGTGGACACCTTTGCTGGAAAAGATGATCATCTTGGTAATGTTGCTATTGATCCAGTTGCCATGGTGAATCAGGCAACTTTTAATGGCGAACAGTTGCAGAATGGAACCAGTCCAGAACTCTCACTTGAAGATGGCCATTTAAGACATGTTGCCATGTCTAACGGCACATATAAGTACTACAAAAGAAGGAAAACTAACAAGCCTTga 4050 0.4138 MAVEEFKCFMRRKRKRGSGKIKLSVNERVEFLIPICFHDSCQYSYSPLSIPQLHGQWGNKMVVALPISFGSAVASAKLHGQWGNKMVVALPISFGSAVACGNEMVVALPISFGSAVAGANKMVVALPILFGSAVARDAPLSVVRSEEEGFLGSWHPGTVIQCGKQKRYVKYDNLLDDNNGSNHLVDVVVVPAVLDGASSTICNERGFIRPFPPMIEFGIWDLPFGLCVDVNFQEAWWEGVIFDHCDGMEERCIFFPDLGDEMKFEIGQLRITHDWNEVTEDWERRGMWIFLELVEECEQDTYVPVSIKQIWYDVRAKKDFDKIRDWTCNVKDLWKVLVFEVVNDYFTLTLKELSKGLLTEAPELESGEPAVNVHLNQEGDTANFHSILHSGKQLNRKSNVHYDDGHSNVFGSDVILAESPMEKGDMSNFLDNDQNSGSIILVQEKYDTDLAGDGASKMPIPETEVLVQKESISPVEEVFPDIAEGISRSDTDAAGEVDSSASCYEKNRRQATRIRSTYWKPLNLSGVKSCPNAINQYALASKRKTRVKLKTKVRKHLAYLGWKIEWTECGSSRRYRYISPDKQGKQVYMSLCQVCEHMKNENKADSLLSKDDQGKLNPTVDSTISHPANSPPPPSIEDVESEFCPEAVLKYYLLAFEKDPKADKKSMIQKARNHLLAAGWNCDHPVERGRGLIYKSPKNKCFGSLRVACRVYIEECLPQWIGSSMLPLDVSEINEENISQGDMNELVLRVSQLLQEEPELRNVNSFPASRSTRNCKLKRSRNLKCRLPKIQRKGLPIRLLRSSKRVQKVCAPSPSHKKPQNVLSWLIDSNVVLPRSKVHYRARGKCHPMAEGRITRDGIKCSCCQNVYSIGGFEHHANGHNNHRPAAASIFLENGKSLLDCQIQIMHDDRTRETTKKPLKGVYRAENDCICSVCHYGGDLILCDQCPSSFHMRCLGLEDIPEGDWFCPSCRCGICGLSKIEGAEDGKFLTCFQCEHKYHAKCLSRSSVYKSGKSPKRRFCGKSCEKIYEGLVKLLGQPVLVGMNNLSWTLLKGGIPEECDLGSTKYDFMVESYSKLNVALSVMHECFEPLQEVHSGRDLVEDVLFSRRSKLNRLNFQGFYTVLLEKNEELISVATVRVYGDKVAEIPLVGTRFQYRRLGMCRVLMDELEKRLMELGVERLVLPAVPSVLETWTTSFGFAKMTSSERSQFMDYTFLDFQDTVMCQKLLTKTRLDLVRSTENQPKPQDVVSASGGTLFDQSSSASEVYQAEGIDKSGMLDLQMVDTFAGKDDHLGNVAIDPVAMVNQATFNGEQLQNGTSPELSLEDGHLRHVAMSNGTYKYYKRRKTNKP 1349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2174 1349 PANTHER PHD ZINC FINGER PROTEIN 140 1283 - -
Sto9g2174 1349 CDD PHD2_CHD_II 931 970 - -
Sto9g2174 1349 MobiDBLite consensus disorder prediction 612 626 - -
Sto9g2174 1349 SMART PHD_3 972 1025 IPR001965 -
Sto9g2174 1349 SMART PHD_3 930 971 IPR001965 -
Sto9g2174 1349 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 140 1283 - -
Sto9g2174 1349 Pfam PHD-finger 930 972 IPR019787 -
Sto9g2174 1349 Pfam Tify domain binding domain 852 904 IPR032308 -
Sto9g2174 1349 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1082 1227 IPR000182 GO:0016407
Sto9g2174 1349 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 916 984 IPR013083 -
Sto9g2174 1349 ProSiteProfiles Zinc finger PHD-type profile. 928 973 IPR019787 -
Sto9g2174 1349 CDD NAT_SF 1122 1182 - -
Sto9g2174 1349 Gene3D - 1082 1226 - -
Sto9g2174 1349 SUPERFAMILY FYVE/PHD zinc finger 918 971 IPR011011 -
Sto9g2174 1349 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1103 1211 IPR016181 -
Sto9g2174 1349 MobiDBLite consensus disorder prediction 606 637 - -
Sto9g2174 1349 Pfam Acetyltransferase (GNAT) family 1110 1185 IPR000182 GO:0016407
Sto9g2174 1349 Pfam Agenet domain 143 213 IPR008395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2174 Sto-Chr9 25434898 25444810 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2174 144 353 PHD Transcription Factor Family AT5G58610 47.222 1.92e-58 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Sto9g2174 Acetyltransf_1 0.0003 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2174 - - lang:109350262 1179.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2174 9 25434898 25444810 Sto9g2174 9 25434898 25444810 ECH