Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2155 ATGGAAGAGGACTTGGAGAAGAATATTAATAAAGTAGAAGTTTCTGGAAAGAAGCTTTCATCGtcaccttcatcatcatcttcatcttcatcttcttcttcttcatcttcgtcTTCTTGGAGTGTTAGGAATGTGTTAAGTAATTTGCGAGAGGTCATATTTGGAACTAAGCTTGCTGTGCTTTTTCCTGCCATCCCTTTAGCTATTGCTGCTGATTTTTACAGCTTTGGAAGGCCATGGATATTTGCTTTGAGCTTACTTGGACTCGCCCCACTAGCTGAACGTGTCAGCTTCCTCACTGAATATGCCCTATCAGGAGGGGGCTATTACCCTATTGCCAATTCCACTCTCCAATTATCAAGAGCTAGCAGTATTGTCATGCTTCTTGCTTATTTTGCTTATATCTTCTTTCAATTGAAAACTCATCGTCAATTGTTTGATTCAcaagaggaagaagatgaagatgaagagaaggctGTGATAGGATTTTGGAGTGCATTTACTTGGTTGGTGGGCATGACAATGATCATATCTTTGCTTTCTGAATATGTTGTGGCCACTATTGagGCTGCTTCAGATTCTTGGGGCATTTCTGTAAGCTTCATTAGCATCATTTTACTACCAATTGTGGGGAATGCTGCAGAACATGCTGGCTCAGTTATATTTGCTTTCAAGAATAAGTTGGACATATCCCTGGGTGTTGCTATGGGATCTGCAACTCAAATTTCCATGTTTGTGGATGGAACCTCACACTACATGAAAGGAGTGGTTCTTTCCCTCTGTTATCTTGTCATTGCTGCTTGCTTTTTTGTTCACAAAGCTCCACTCCCGAATGAAATTGCTGGGGGCAATCTGCCATCATTGGGTTCCATGGCCACTTGA 882 0.3753 MEEDLEKNINKVEVSGKKLSSSPSSSSSSSSSSSSSSSSWSVRNVLSNLREVIFGTKLAVLFPAIPLAIAADFYSFGRPWIFALSLLGLAPLAERVSFLTEYALSGGGYYPIANSTLQLSRASSIVMLLAYFAYIFFQLKTHRQLFDSQEEEDEDEEKAVIGFWSAFTWLVGMTMIISLLSEYVVATIEAASDSWGISVSFISIILLPIVGNAAEHAGSVIFAFKNKLDISLGVAMGSATQISMFVDGTSHYMKGVVLSLCYLVIAACFFVHKAPLPNEIAGGNLPSLGSMAT 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2155 293 Gene3D - 41 277 IPR044880 -
Sto9g2155 293 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 247 281 IPR004713 GO:0006812|GO:0008324|GO:0016021
Sto9g2155 293 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 4 102 IPR004713 GO:0006812|GO:0008324|GO:0016021
Sto9g2155 293 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 110 246 IPR004713 GO:0006812|GO:0008324|GO:0016021
Sto9g2155 293 MobiDBLite consensus disorder prediction 1 39 - -
Sto9g2155 293 Pfam Sodium/calcium exchanger protein 166 255 IPR004837 GO:0016021|GO:0055085
Sto9g2155 293 PANTHER VACUOLAR CATION/PROTON EXCHANGER 4 102 - -
Sto9g2155 293 PANTHER VACUOLAR CATION/PROTON EXCHANGER 247 281 - -
Sto9g2155 293 PANTHER VACUOLAR CATION/PROTON EXCHANGER 110 246 - -
Sto9g2155 293 MobiDBLite consensus disorder prediction 14 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2155 Sto-Chr9 25263834 25267296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2155 112 275 Antiporters AT2G38170 58.654 3.15e-75 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2155 K07300 - gmx:100802344 279.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2155 9 25263834 25267296 Sto9g2155 9 25263834 25267296 ECH