Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2151 ATGAGACTATCATACAGTCCAGTAGCCCCCCTTTTACTTTTTCTTGTTCAGTGGACAGATTACAGCTTGGCCGATGCTCTGGGTTTGCTAAGAGTTCTAATTTATATGACCTATGAAGATGGGAAGAACACCATGTCAATATATGAAAGGAAAGCAAGCATTAAACAGTTTAACTCGGTGATATATCCTGCTTTATTGCAACTTCAGAAAGGCATCTCAGATTTGGAGGAAAGAAAACAGAGAGAAGTATCTGCTGTTAGATataaaaggaaggaaaatgGATCTAAAATTGACATGGAAAGAGAAGAGGAATGTGGAATTTGCCTGGAGGCGATGCCAAAAGTTGTGCTGCCTAATTGCTGCCATTCTATGTGTTTGAAGTGCTTCAGGGATTGGCGTGCGAGATCGCAGTCTTGCCCCTTTTGCCGGGACAATCTACAGAGGGTCAACTCAGGTGACCTTTGGAATTACACAGATACTTGTGATATTGTTGATGTTAGGACGGTTTTCAAAGAAAACCGAAAGAGGCTGCTTTTCTACATAGAGAAGTTGCCTATTGTTGCTCCAGACCCCATCCATGTGTCCTATGAACCGTGTAGGAGGTGA 606 0.4142 MRLSYSPVAPLLLFLVQWTDYSLADALGLLRVLIYMTYEDGKNTMSIYERKASIKQFNSVIYPALLQLQKGISDLEERKQREVSAVRYKRKENGSKIDMEREEECGICLEAMPKVVLPNCCHSMCLKCFRDWRARSQSCPFCRDNLQRVNSGDLWNYTDTCDIVDVRTVFKENRKRLLFYIEKLPIVAPDPIHVSYEPCRR 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2151 201 SUPERFAMILY RING/U-box 96 148 - -
Sto9g2151 201 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 198 - -
Sto9g2151 201 SMART ring_2 105 142 IPR001841 -
Sto9g2151 201 ProSiteProfiles Zinc finger RING-type profile. 105 143 IPR001841 -
Sto9g2151 201 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 72 153 IPR013083 -
Sto9g2151 201 PANTHER RING FINGER PROTEIN 41, 151 1 198 - -
Sto9g2151 201 Pfam Zinc finger, C3HC4 type (RING finger) 102 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2151 Sto-Chr9 25206727 25208088 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2151 45 146 C3H Transcription Factor Family AT1G04360 22.222 2.13e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2151 - K25840 gmx:100808567 312.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2151 9 25206727 25208088 Sto9g2151 9 25206727 25208088 ECH