Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2132 ATGAGAATTCCGTCGAATTCGCCGGACATGATCAGAAACCCTAATTTGACGGCGGAAGAGAACGAGAGGAACGAGAGCTCTCGTTGGAGCGCGGAGGATAACAAGATTTTCGAGAGAGCTCTGGCGTTGTACGATAAAAACTCGGCAGATTATTTGCAGAAGGTGGCGGCGGCGGTGCCGGGGAAGACGATCGGAGACGTCAAGAGGCAGATCGAAGTGCTTATGGAAGATATTCAGAACATAGAAGCGGGATTCGTGGTTATGCCTAATTACGATAAGGCTATTCCTGGATTTTCGTGGGATTACGGAGTGAACTCTGCTCCTACGTTTCAAGTCTCAGAAGAACCCTATGGAAGGAGACCCTGTCCTTCAATGAGATACACTGAGTCTGGAAGGAAGAAAGGAGTCCCATGGACTGAAGAAGAGCACAGGATGTTTCTGGTGGGGCTGGAGAAGTGTGGGAAAGGAGATTGGAGGACCATATCTCGGGTTTTCGTGGTAACTCGGACACCAACTCAGGTAGCTAGCCATGCCCAGAAGTTCTTCATCAGGCAGAACACTGCAGGCAAGGAGAGGAGGAGAGCCAGCATCCATGATATCACCACCCCCATGTGCACACCCAACCATATCCATCATCATACCACTTCACCACCTATTTCTATTCCACCACATACATGCCAACGCCACACTTTTTCTTCTCATGCCTCTCCACAACACTTTCATCACTCTTCATCTCAGCCCCCTCCTCCACAACACTTTCATCACTCCTCTTTTCCACAACACTTTAATCGCTCTTCATCTCCACGACACTTTCTTCAGTCCTTTCCTCCACAACACTTTAATCAGTCTTCTTCTCCACAACAGATTATTCAGTCTTCATCTCCACAACACTTTAATCAGTCCTTTCCTCCACAACACTTTAATCAGTCTTCTCCTCCACAACAAATTATTCAGTCTTCTTCTCCACAACAGTTTAATCAGTCTTCTTCTCCACAACAGATTATTCAGTCTTTATCTACACAACAGTTTAATCAGTCTTGTTCTCCACAGCAGTTTAATCAGTCTTCTTCTCCACAACAGTTTAATCACTCTTATGCTCCACAACAGATTATTCAGTCTTCATCTACACAACAGTTTAATCAGTCTTCATCTACACAACAGTTTAATCAGTCTTGTTCTCCACAACAGTTTAATCAGTCTTATTCTCCACAACAGTTTAATCAGTCTTGTTCTCCACAACAGTTTAATCACTCTTCATCTACACAACAGTTTAATCAGTCTTGTTCTCCACAACAGTTTAATCAGTCTTATTCTCCAGAACAGTTTAATCAGTCATTTCCTCCACCACACTTAGTTAGTCACTCTTCTTCTCCACAACAGTTTCATCAtcactcttcttctccatcacaGTTTCAATGGAGCCAGCAGCAACACAATGTGGGAGGAGTGGTTATGGATGATGCTCTCGGTGATGTTCCAGCACATGATGATGGGAATAATGGGACTTTGATGCTTCATCCTTATGTCTCTCAAGAGTTTAAGATGTCAGACGACCAGATGAGGCGTTTAGATGATCTTGTTCGTCTGACTCAAAGTCAGAACATGCGTCGCAATGGCCATGCTGTGTAG 1629 0.4383 MRIPSNSPDMIRNPNLTAEENERNESSRWSAEDNKIFERALALYDKNSADYLQKVAAAVPGKTIGDVKRQIEVLMEDIQNIEAGFVVMPNYDKAIPGFSWDYGVNSAPTFQVSEEPYGRRPCPSMRYTESGRKKGVPWTEEEHRMFLVGLEKCGKGDWRTISRVFVVTRTPTQVASHAQKFFIRQNTAGKERRRASIHDITTPMCTPNHIHHHTTSPPISIPPHTCQRHTFSSHASPQHFHHSSSQPPPPQHFHHSSFPQHFNRSSSPRHFLQSFPPQHFNQSSSPQQIIQSSSPQHFNQSFPPQHFNQSSPPQQIIQSSSPQQFNQSSSPQQIIQSLSTQQFNQSCSPQQFNQSSSPQQFNHSYAPQQIIQSSSTQQFNQSSSTQQFNQSCSPQQFNQSYSPQQFNQSCSPQQFNHSSSTQQFNQSCSPQQFNQSYSPEQFNQSFPPPHLVSHSSSPQQFHHHSSSPSQFQWSQQQHNVGGVVMDDALGDVPAHDDGNNGTLMLHPYVSQEFKMSDDQMRRLDDLVRLTQSQNMRRNGHAV 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2132 542 MobiDBLite consensus disorder prediction 1 30 - -
Sto9g2132 542 Gene3D - 136 187 - -
Sto9g2132 542 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 23 221 - -
Sto9g2132 542 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 133 185 IPR006447 GO:0003677
Sto9g2132 542 CDD SANT 137 182 IPR001005 -
Sto9g2132 542 ProSiteProfiles Myb-like domain profile. 130 182 IPR001005 -
Sto9g2132 542 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 132 186 IPR017930 -
Sto9g2132 542 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 23 221 IPR043363 -
Sto9g2132 542 MobiDBLite consensus disorder prediction 16 30 - -
Sto9g2132 542 ProSiteProfiles SANT domain profile. 138 186 IPR017884 -
Sto9g2132 542 SMART sant 25 77 IPR001005 -
Sto9g2132 542 SMART sant 134 184 IPR001005 -
Sto9g2132 542 Pfam Myb-like DNA-binding domain 137 180 IPR001005 -
Sto9g2132 542 SUPERFAMILY Homeodomain-like 131 186 IPR009057 -
Sto9g2132 542 Gene3D - 20 87 - -
Sto9g2132 542 SUPERFAMILY Homeodomain-like 29 82 IPR009057 -
Sto9g2132 542 MobiDBLite consensus disorder prediction 202 475 - -
Sto9g2132 542 CDD SANT 28 70 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2132 Sto-Chr9 25087588 25090670 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto9g2132 Myb_DNA-binding 6.9e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2132 - - sspl:121762186 209.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2132 9 25087588 25090670 Sto9g2132 9 25087588 25090670 ECH
Sto9g2132 9 25087588 25090670 Sto5g1550 5 10778314 10779622 ECH
Sto9g2132 9 25087588 25090670 Sto5g4311 5 51869099 51870552 ECH
Sto8g1130 8 7168582 7171213 Sto9g2132 9 25087588 25090670 ECH
Sto1g2301 1 30991622 30992851 Sto9g2132 9 25087588 25090670 ECH