Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2086 ATGGATTCCATAAATGAAAGACCAATTGAGGAGCACGAAAAGGAAACTCTTCATAGCCCCGAAATAACTGCTCGAAAGTCAGAATCAATCATGGTGGCTGAACAGGGATCAGGTTGTGAAGGACTGTGTGCCGCTCATTGCAAAATATTTAGGGGTATTATATGCAGAAGTATACAAACTGTTGTTTTCTCAAGTAGACTCAACTTACTTATGCCTTTTGGGCCTTTGGCAATTGTTGTTGCGAATTTGACGAATCATCATGGTTGGGTCTTCACTTTGAGTTTATTGGGGATAATGCCTCTGGCTGAGCGGCTAGGTTATGCTACAgaGCAGCTGGCATTTTACGCTGGAGATACTGTTGGGGGTCTTCTAAATGCTACATTTGGAAATGCAACAGAACTGATCATTTCATTATATGCATTGAAAAGTGGAATGACACGAGTTGTCCAGCTCTCTTTGTTGGGATCAATTTTGTCAAATATGTTGCTGGTGCTTGGATGTGCATTTCTAAGTGGCGGGATTGTTTTTAATAAGAAGGAGCAGGTTTTTAACAAGGCCACTGCTACTGTAAACTCAGGATTGTTGTTGATGGCTGTCATGGGCTTGCTTTTTCCTACTGTGCTTCACTACACACACACTGAGGTGAATTTTGGGAAGTCGGAATTGGCCCTTTCAAGATTCAGCAGCTGCATCATGCTTTTGGCTTATACTGCATACCTATTTTTCCAGTTAAAGAGTCAAAGAAATCTCTATGTCTCTCTGGCTGAGGAAGAGGAGCAAAGTGGAGACAACTTAGAAGACGATGAATCTCCAAATATCTCTAAGTGGGAATCAGTAATTTGGCTCATAGTTATGACTGCTTGGATATCTATTCTGTCAGAATATTTGGTTGGTGCTATAGAGGGAGCATCTACTGCATGGAATTTGCCAGTAGCTTTTATTAGTGTTATATTGCTTCCACTGGTGGGAAATGCTGCAGAGCATGCCAGTGCTGTCATGTTTGCCATGAAAGACAAGCTTGATATTTCCTTAGGAGTAGCAATAGGGTCCTCCACACAGATAGCTATGTTTGTGATACCATTTTGTGTGGTTATTGGCTGGATAATGGGACGTCCTTTGGACTTGAACTTCCAACTTTTTGAGACTGCAACACTATTTCTAACTGTTATAGTTGTAGCATTCCTGTTGCAGGAAGGAACCTCTAATTACTTCAAAGGACTTATGCTTGTTCTTTGCTATCTGATAGTGGCAGCAAGCTTTTTTGTACATGTAGATTCCTCTTCATGA 1287 0.411 MDSINERPIEEHEKETLHSPEITARKSESIMVAEQGSGCEGLCAAHCKIFRGIICRSIQTVVFSSRLNLLMPFGPLAIVVANLTNHHGWVFTLSLLGIMPLAERLGYATEQLAFYAGDTVGGLLNATFGNATELIISLYALKSGMTRVVQLSLLGSILSNMLLVLGCAFLSGGIVFNKKEQVFNKATATVNSGLLLMAVMGLLFPTVLHYTHTEVNFGKSELALSRFSSCIMLLAYTAYLFFQLKSQRNLYVSLAEEEEQSGDNLEDDESPNISKWESVIWLIVMTAWISILSEYLVGAIEGASTAWNLPVAFISVILLPLVGNAAEHASAVMFAMKDKLDISLGVAIGSSTQIAMFVIPFCVVIGWIMGRPLDLNFQLFETATLFLTVIVVAFLLQEGTSNYFKGLMLVLCYLIVAASFFVHVDSSS 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2086 428 TIGRFAM cax: calcium/proton exchanger 71 421 IPR004798 GO:0006816|GO:0015369
Sto9g2086 428 PANTHER VACUOLAR CATION/PROTON EXCHANGER 2 3 427 - -
Sto9g2086 428 MobiDBLite consensus disorder prediction 1 20 - -
Sto9g2086 428 Pfam Sodium/calcium exchanger protein 89 244 IPR004837 GO:0016021|GO:0055085
Sto9g2086 428 Pfam Sodium/calcium exchanger protein 278 418 IPR004837 GO:0016021|GO:0055085
Sto9g2086 428 Gene3D - 116 257 IPR044880 -
Sto9g2086 428 Gene3D - 265 422 IPR044880 -
Sto9g2086 428 TIGRFAM caca2: calcium/proton exchanger 57 421 - -
Sto9g2086 428 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 3 427 IPR004713 GO:0006812|GO:0008324|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2086 Sto-Chr9 24756917 24760751 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2086 11 425 Antiporters AT1G55730 70.096 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2086 K07300 - gmx:100799276 652.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2086 9 24756917 24760751 Sto9g2086 9 24756917 24760751 ECH