Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2083 ATGTCCGGAACCCTCAATTTCACTCTCCCCGCCGTCCGCCCACTCCGATTCCCCTCCTCCGACGATTGCTTACCGTCGTCGTCGTCCTCGTCCTTCTCCGTGAAGGTCCTCCGGCGGCCGTATCAATGTAGGGCTTCGATCCGGTCTTTTGCGACGGAGGCCAACTCGGCGGTGATCGGATCTCGTCGGCCGGCGAGCCTCTACGAGGTGCTGCGAGTAAGCCAGAGCGCTTCCCCTAGGGAGATCAAGTCGGCTTACCGGAATTTGGCGAAGATCTACCACCCTGATTCGGCGGTGAACCGAGCGGATCCCGACGATATGGACTTCATCGAGATCCACAACGCCTATGCCACGCTGTCCGATCCATCGGCGAGAGCGATCTACGATCTCTCGTTGATGGCTATTCATGGGAGGAGGCGTCCGTTTTCTGCATCGTCGACGGTGGATCAGGATTGCTCTCCCGGGTTTTATTCGACCCGGAGATGGGAGACGGATCAATGCTGGTAG 507 0.5897 MSGTLNFTLPAVRPLRFPSSDDCLPSSSSSSFSVKVLRRPYQCRASIRSFATEANSAVIGSRRPASLYEVLRVSQSASPREIKSAYRNLAKIYHPDSAVNRADPDDMDFIEIHNAYATLSDPSARAIYDLSLMAIHGRRRPFSASSTVDQDCSPGFYSTRRWETDQCW 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2083 168 SUPERFAMILY Chaperone J-domain 66 150 IPR036869 -
Sto9g2083 168 Gene3D DnaJ domain 52 147 IPR036869 -
Sto9g2083 168 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 8 168 - -
Sto9g2083 168 SMART dnaj_3 65 124 IPR001623 -
Sto9g2083 168 CDD DnaJ 68 121 IPR001623 -
Sto9g2083 168 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 8 168 - -
Sto9g2083 168 ProSiteProfiles dnaJ domain profile. 66 132 IPR001623 -
Sto9g2083 168 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
Sto9g2083 168 PRINTS DnaJ domain signature 68 86 IPR001623 -
Sto9g2083 168 PRINTS DnaJ domain signature 86 101 IPR001623 -
Sto9g2083 168 PRINTS DnaJ domain signature 104 124 IPR001623 -
Sto9g2083 168 Pfam DnaJ domain 67 129 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2083 Sto-Chr9 24733971 24734477 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2083 68 129 C2H2 Transcription Factor Family AT1G74250 45.455 1.69e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2083 - - aprc:113848328 174.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2083 9 24733971 24734477 Sto9g2083 9 24733971 24734477 ECH