Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2081 ATGAAGATCACTGTAATGACGGCCGACGAACAAATTATTACGTTGGATGTCGATCCCCATGAATCTGTGGAAAATGTCAAAGCATTGCTTGAGGTGGAGACACAAGTGCCTCTTCAGCAGCAACAACTTCTCTATAACGGAAGGGAGATGAGGAATTCTGAGAAATTGAGTGCGCTTGGTGTTAAAGATGAAGATTTGGTGATGATGGTCTCTGCTGCTTCATCTGGTGCATCTGCCAGTGATTTGCGCTTCAATCCTGATGGATCTGCTGTTAACCCTGCTGCTTTCCAGCAGCACATCAGACATGATTCTAACATGCTGGGTCAGCTCTTTCAGAATGATCCAGAGTTAGCACAAGCTATTCTAGGAAATGATCTTAATAGAATACAGGAGCTTTTACGAATGCGGAATAAACATAGAGCTGAATTACAGCGCCAAAAAGATGAGGAACTTgctCTTCTTTATGCAGATCCTTTTGACGTTGAAGCACAAAAGAAGATTGAAGCTGCCATTCGCCAGAAAGGAATTGATGAAAACTGGGAAGCAGCACTAGAATATAATCCAGAAGCTTTTGCAAGAGTGGTCATGTTGTATGTTGACATGGAGGTTAATGGTGTCCCACTGAAGGCATTTGTTGATAGTGGAGCCCAGTCTACAATTATATCAAAAAGCTGTGCTGAGCGCTGTGGATTGTTGAGACTTTTGGATCAGCGCTACAGGGGAATTGCTCATGGAGTTGGCCAATCTGAGATATTGGGTAGAATACATGTAGCTCCAATCAAGATTGGCAATATATTCTACCCTTGTTCATTCCTAGTGCTGGATTCTCCTAATATGGAGTTCCTCTTTGGGCTGGATATGCTGCGTAAACACCAGTGTATTATAGATTTGAAAGAAAGTGTTTTGCGAGTCGGTGGAGGAGAAGTTTCTGTGCCATTTTTGCAAGAGAAAGACATACCATCTCGGTTTCTGGATGAAGGAAGACATGCTAAGGAAGCTTCCAGCTCAGGTGGCACGGCAACAACAGCAACGGATGATAGGAGCAATAATCCATCAAGAGGAGGCCAATCTTCAGAATATAATCTGTGTGTATGGTTGCAGGATGCTGAATTTGAAGCCAAAGTGGCAAAGCTGATTGAGTTAGGATTTGGAAGAGAAGCAGTTGTAGAAGCTCTTAAGGTATGCAATGGCAATGAGGAACAGGCAGCTGGATATCTCTTTGGGGGTTTCTAG 1233 0.4315 MKITVMTADEQIITLDVDPHESVENVKALLEVETQVPLQQQQLLYNGREMRNSEKLSALGVKDEDLVMMVSAASSGASASDLRFNPDGSAVNPAAFQQHIRHDSNMLGQLFQNDPELAQAILGNDLNRIQELLRMRNKHRAELQRQKDEELALLYADPFDVEAQKKIEAAIRQKGIDENWEAALEYNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCAERCGLLRLLDQRYRGIAHGVGQSEILGRIHVAPIKIGNIFYPCSFLVLDSPNMEFLFGLDMLRKHQCIIDLKESVLRVGGGEVSVPFLQEKDIPSRFLDEGRHAKEASSSGGTATTATDDRSNNPSRGGQSSEYNLCVWLQDAEFEAKVAKLIELGFGREAVVEALKVCNGNEEQAAGYLFGGF 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2081 410 PANTHER AT13091P 1 407 - -
Sto9g2081 410 ProSiteProfiles Ubiquitin domain profile. 1 76 IPR000626 GO:0005515
Sto9g2081 410 SUPERFAMILY Acid proteases 181 297 IPR021109 -
Sto9g2081 410 Pfam Ubiquitin family 3 70 IPR000626 GO:0005515
Sto9g2081 410 SUPERFAMILY UBA-like 368 409 IPR009060 GO:0005515
Sto9g2081 410 Gene3D - 372 407 - -
Sto9g2081 410 Gene3D - 1 83 - -
Sto9g2081 410 PANTHER ASPARTYL PROTEASE DDI-RELATED 1 407 - -
Sto9g2081 410 Pfam Aspartyl protease 174 296 IPR019103 GO:0004190|GO:0006508
Sto9g2081 410 CDD RP_DDI 181 304 IPR019103 GO:0004190|GO:0006508
Sto9g2081 410 CDD Ubl_Ddi1_like 1 70 IPR033882 -
Sto9g2081 410 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 366 409 IPR015940 -
Sto9g2081 410 SMART uba_6 371 408 IPR015940 -
Sto9g2081 410 MobiDBLite consensus disorder prediction 328 356 - -
Sto9g2081 410 SUPERFAMILY Ubiquitin-like 1 80 IPR029071 -
Sto9g2081 410 SMART ubq_7 1 72 IPR000626 GO:0005515
Sto9g2081 410 CDD UBA_scDdi1_like 372 407 - -
Sto9g2081 410 MobiDBLite consensus disorder prediction 334 356 - -
Sto9g2081 410 Pfam UBA/TS-N domain 372 406 IPR015940 -
Sto9g2081 410 Gene3D Acid Proteases 175 321 IPR021109 -
Sto9g2081 410 Coils Coil 129 149 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2081 1 77 Cytoplasmic Ribosomal Protein Gene Family AT3G62250 28.571 1.23e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2081 K11885 - zju:107417635 654.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2081 9 24706419 24714278 Sto9g2081 9 24706419 24714278 ECH