Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2071 ATGGATAATAAATCTGCTGTGGATTTAATGGAGTCTTCCTCTGAGGTTCATTTTTCTGGATTTCACATGGATGGTTTAGCGCAGAGAAATGGCAGCACAGAGCAGCCAACAACTTCAGCGACTGACATGCATAAGCAACCTTTTGTTATTGGTGTTGCTGGGGGAGCTGCATCTGGGAAGACAACAGTTTGTGATATGATTATTCAGCAGCTTCATGACCAACGAGTTGTACTTGTTAATCagGATTCTTTTTATCATAACTTGACTGAAGAGGAACTTACAAGAGTACAAGATTACAACTTCGACCATCCTGATGCTTTTGATACCGAGCAATTGTTACGTGTTATGGACAAGTTAAGGCATGGCCAAGCTGTAGATATTCCAAACTATGACTTCAAGAGTTATAAGAGTGATGCATTTCAAAAAAGAAGGGTGAATCCTTCAGATGTTATAATTTTGGAAGGCATTCTTATTTTCCATGATCCCCGTGTTCGGGAGCTTATGAATATGAAGATATTTGTTGACACAGATGCTGATGTTCGTTTGGCTAGGAGAATTAGGCGTGACACTGGTGAGAAGGCTCGGGATATTGGCTTAGTGCTTGATCAGTATTCTAAATTTGTGAAGCCAGCTTTTGATGACTTTATTCTTCCGACTAAGAAATATGCTGATATCATTATACCCCGTGGAGGAGATAATCATGTGGCCATTGATTTGATTGTACAGCATATCCGCACAAAGCTTGGTCAGCATGATCTGTGTAAAATACATCCTAATCTGTATGTCATTCAATCAACTTTTCAGATAAGGGGTATGCATACCCTGATACGCGATTCTCAGACAACGAAGCATGATTTTGTGTTTTATGCTGACCGTTTGATTCGTTTGGTTGTAGAACATGGCCTGGGGCATCTTCCATTTACAGAAAAGCAAGTAATCACTCCAACAGGGTCTGTATATACTGGTGTGGATTTTTGCAAGAGGTTATGTGGTGTCTCCATTATCAGGAGTGGGGAGAGTATGGAGAATGCTTTACGTGCGTGTTGTAAAGGTATCAAGATTGGAAAAATTCTTATTCATAGAGAAGGTGACAATGGCCAGCAGCTTATATACGAAAAGTTGCCTAATGATATCTCAGATAGGCATGTCTTACTGTTGGATCCTATCCTAGGCACAGGTAATTCTGCTGTTCAAGCAATTTCTTTGCTTTTAAGAAGGGGTGTGCCGGAGTCCAACATTATATTTCTCAATCTCATATCAGCACCTCAAGGTGTGCATGTAGTCTGCAAAAGTTTCCCGAGAATAAAAATCGTGACATCGGAGATAGACATTGGTTTGAATGAAGATTTCCGAGTGGTACCCGGCATGGGGGAGTTTGGAGATCGGTATTTTGGAACAGATGATGACGACGAGGAAGTTACGACCCCTTTAAAATAG 1437 0.4071 MDNKSAVDLMESSSEVHFSGFHMDGLAQRNGSTEQPTTSATDMHKQPFVIGVAGGAASGKTTVCDMIIQQLHDQRVVLVNQDSFYHNLTEEELTRVQDYNFDHPDAFDTEQLLRVMDKLRHGQAVDIPNYDFKSYKSDAFQKRRVNPSDVIILEGILIFHDPRVRELMNMKIFVDTDADVRLARRIRRDTGEKARDIGLVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIHPNLYVIQSTFQIRGMHTLIRDSQTTKHDFVFYADRLIRLVVEHGLGHLPFTEKQVITPTGSVYTGVDFCKRLCGVSIIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPNDISDRHVLLLDPILGTGNSAVQAISLLLRRGVPESNIIFLNLISAPQGVHVVCKSFPRIKIVTSEIDIGLNEDFRVVPGMGEFGDRYFGTDDDDEEVTTPLK 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2071 478 PRINTS Uridine kinase signature 47 64 - -
Sto9g2071 478 PRINTS Uridine kinase signature 77 88 - -
Sto9g2071 478 PRINTS Uridine kinase signature 122 137 - -
Sto9g2071 478 PRINTS Uridine kinase signature 179 189 - -
Sto9g2071 478 PRINTS Uridine kinase signature 193 204 - -
Sto9g2071 478 PRINTS Uridine kinase signature 215 228 - -
Sto9g2071 478 PANTHER URIDINE KINASE 15 469 - -
Sto9g2071 478 SUPERFAMILY PRTase-like 250 467 IPR029057 -
Sto9g2071 478 CDD UMPK 49 247 IPR000764 -
Sto9g2071 478 PANTHER URIDINE KINASE 15 469 - -
Sto9g2071 478 Pfam Phosphoribulokinase / Uridine kinase family 49 235 IPR006083 GO:0005524|GO:0016301
Sto9g2071 478 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 39 240 IPR027417 -
Sto9g2071 478 CDD PRTases_typeI 324 439 IPR000836 -
Sto9g2071 478 Gene3D - 43 250 IPR027417 -
Sto9g2071 478 Gene3D - 251 466 IPR029057 -
Sto9g2071 478 Pfam Uracil phosphoribosyltransferase 265 466 - -
Sto9g2071 478 TIGRFAM udk: uridine kinase 46 247 IPR000764 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2071 Sto-Chr9 24626377 24633707 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2071 1 469 PRT Gene Family AT4G26510 84.567 0.0 819
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2071 K00876 - gmx:100527893 881.708
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2071 9 24626377 24633707 Sto5g1800 5 13112927 13123462 CCT
Sto9g2071 9 24626377 24633707 Sto9g2071 9 24626377 24633707 ECH