Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2068 ATGCCTGGAAGCttaagaaatccttcactttctcATCCCAAagtcttctccttctccttttccttcacCTTACTCCTCTCAATAAACTTTCTTCTCTTCCCATGCTGTTTCTCCATTGATGAGCAAGGCCAAGCTCTTTTAGCATGGAAGAACAGTTTGAACAGTACAGGAGATGATGCATTAGCATCTTGGAATCCTGCAGATTCAAACGCCTGCAAATGGGTTGGAGTTCATTGCAACTCCAAGGGAGATGTGGAAGAGATAAACTTGAAATTTGTGCACTTGCAAGGCTCATTACCTTCAAATTTTCAATCTCTCAAGTCTTTGAAGGTTCTTGTCCTCTCATCAACCAACCTCACAGGCACAATCCCAAGAGAGATTGGAGAGTATGAGGAGCTTATTTCTATTGATCTTAGCGGGAATTATCTCTTGGGTGAAATCCCAGAAGATATTTGCAGGCTAAGAAAACTTGAGAGTTTGTCTCTTCACACAAACTTCCTTGAAGGTGACATTCCAGCCAACATTGGGAATCTATCAAGTCTTGTGAATCTGACACTTTATGATAATCAACTCAGTGGGGAAATCCCAAAGAGTGTTGGATCCTTAAGAAGGCTTCAAGTTTTCAGAGCAGGTGGGAATAAGAATCTCAAAGGTGAGCTGCCATGGGAGATTGGAAACTGCACCAACCTGGTCATGTTAGGCCTTGCAGAAACCAGCATTTCTGGAAGCCTTCCTTCTTCAATAGGAATGCTCAAGAAGATTCAAACCATAGCCATTTACACAACTCTCTTGTCAGGCTCCATTCCAGAGGAGATTGGGAATTGCAGTGACTTGCAGAACCTGTACTTGTATCAGAACTCTATTTCAGGTCCAATCCCAAGGCAAATTGGGAATCTCAAAAAGCTTCAGAGCATTCTCTTATGGCAGAACAGTATTGTGGGCACAATCCCAGAAGAGCTTGGAAGCTGCTCAGAGCTCAAAGTCATAGACTTTTCAGAAAACCTCCTTACAGGAACCATACCAAGGAGTTTTGGGATGCTTTCAAATCTTGAAGAGCTTCAGTTAAGTGTTAATCAATTGTCAGGTACTATACCTCCTGAGATTACAAATTGCACTTCTCTGACTCAGTTGGAACTTGACAACAATGCTCTTTCTGGTGAGATTCCTGCTCTTATTGGCAACTTGAAAAGCTTGAACCTGTTCTTTGCATGGCAGAACAAGCTCACAGGCAAAATCCCAGATAGTCTCTCTCAGTGCCAAGATCTTCAAGCACTTGATCTATCTTACAATAGTCTAATTGGTTTCATACCAAAAGAGCTATTTCAATTGAGGAATCTCACTAAACTCTTGCTTATTTCCAATGAATTATCAGGCTTTGTTCCTCCTGATATAGGTAACTGCACAAGTCTCTACAGATTAAGGTTGAACCACAATAGACTTGCAGGCTCCATTCCATCTGAGATTGGAAACTTGAAAAATCTCAACTTCATGGATATGAGCAGCAATCACTTTGTAGGGGAGATTCCTCCAACACTATCTGAATGCCAAAACCTTCAGTTTCTTGACCTCCATTCAAATTCTCTCACCGGTTCTGTTCCAGGGACTCTTCCCAGAAGCCTTCAGTTAGTAGATTTCTCAGATAATATGCTCACTGGTTCACTGAGTCACACCATTGGTTCATTAACTGAACTAACTAAGCTCAACCTGGGAAAGAACCAACTCAGTGGAAGAATCCCAGAAGAAATCTCATCCTGCATTAAGCTTCAACTTATAGACTTGGGAAGCAATGATCTCTCTGGAGAAATCCCAAATCAACTTGGTCAAATCCCTTCATTGGAAATCTCTTTAAACCTcagctcaaatcaactctctgGCCAAATCCCATCTCAATTCTCTGGTCTTACCAAACTGGGTGTGCTTGATCTCTCCCACAACAACCTCTCAGGGAACCTAAATTCTCTATCTGACCTTCAAAACCTCGTCTCTCTCAATGTCTCCTTCAATGACTTCTCTGGCGAATTACCCGACACCCCATTTTTCAAAAGACTCCCTTTAAGCGACCTCACTGCAAACAAAGGCCTCTACATCGCCGGCGCCGGAGTTCTAACTCCGGCCGACGGAGTGGGACCCATGAAATCCCACGCCAGAACAGCAATGAAGTTCATATTATCCATTCTTTTGACTCTAAGCACAATACTAGCACTCCTCACAGTCTACGCCTTCATTCGTTCCCACATCACAAACAGAGCAATCATGGAAGAAGACAACGCATGGGAGATGACACTATACCAGAAGCTCGAACTCTCCTCCATCGATGACGTCATCAAGGGCCTAACATCATCcaacgtgatcggcacgggaagcTCCGGGGTAGTATACAGAGTAACAATCCCCAACGGGGAAACCCTAGCGGTGAAAAAGATGTGGTCATCGGAAGAATCCGGAGCGTTCGATTCGGAGATTCGGACCCTAGGTTCGATCCGACACAAGAACATCGTGAGGCTCCTGGGTTGGGGATCGAACAGGAAGCTGAAGCTTCTGTTCTACGATTACCTGCCGAATGGGAGCCTGAGCTCGATGCTGCACGGGTCCGGGAAGGGAGGGGCGGAGTGGGAGACGAGGTACgaggtggtggtgggtgtggctCACGCGCTGGCGTACTTGCACCATGACTGTGTGCCGGCGATACTGCACGGAGATGTGAAGGCGATGAATGTGTTGTTGGGAGATGGGCTTCAAGCGTACCTTGCGGATTTTGGATTGGCGAGGGTTGTTAGTGgaaatggtggtggtggtgatggtgatggtgatggtgaagGTGAGGATTCGAAGCCTGTACAAAGACCGTACCTTGCTGGTTCCTATGGATACATGGCTCCTGAGCATGCATCAATGCAATTACGAATCACAGAAAAAAGCGACGTGTACAGTTTCGGTGTGGTTCTCCTCGAGGTCCTAACAGGTCGGCACCCACTTGACCCAACCCTGCCTGCCGGTGCACACATGGTCCAGTGGGTTCGCAACCACTTAGCCAGCAGAGGTGACCCATCCCACATCCTTGACCCAAACCTCAGGGGCAGGGCTGACCCTACAATGCACGAGATGCTTCAGACCCTGGCTGTGTCCTTCCTCTGTGTCAGCACCAAACCAGACGACCGTCCTACAATGAAGGACGTCGTGGCCATGCTTAAGGAAATTAGACCCCTTGAGGCCTCAAGAGTAATGGATTCTGATGGGTTGAAGAAGGCAAGTTCAGGGGTATTATCGTCATCTTCACCGTACCCTATAATACCGCCACCTAATAATAAGGGATTAGTCTCACAATATGGGTCTTCTAACTGCTCCTTTAATTTCTCAGATGATTCAATCTGA 3372 0.4371 MPGSLRNPSLSHPKVFSFSFSFTLLLSINFLLFPCCFSIDEQGQALLAWKNSLNSTGDDALASWNPADSNACKWVGVHCNSKGDVEEINLKFVHLQGSLPSNFQSLKSLKVLVLSSTNLTGTIPREIGEYEELISIDLSGNYLLGEIPEDICRLRKLESLSLHTNFLEGDIPANIGNLSSLVNLTLYDNQLSGEIPKSVGSLRRLQVFRAGGNKNLKGELPWEIGNCTNLVMLGLAETSISGSLPSSIGMLKKIQTIAIYTTLLSGSIPEEIGNCSDLQNLYLYQNSISGPIPRQIGNLKKLQSILLWQNSIVGTIPEELGSCSELKVIDFSENLLTGTIPRSFGMLSNLEELQLSVNQLSGTIPPEITNCTSLTQLELDNNALSGEIPALIGNLKSLNLFFAWQNKLTGKIPDSLSQCQDLQALDLSYNSLIGFIPKELFQLRNLTKLLLISNELSGFVPPDIGNCTSLYRLRLNHNRLAGSIPSEIGNLKNLNFMDMSSNHFVGEIPPTLSECQNLQFLDLHSNSLTGSVPGTLPRSLQLVDFSDNMLTGSLSHTIGSLTELTKLNLGKNQLSGRIPEEISSCIKLQLIDLGSNDLSGEIPNQLGQIPSLEISLNLSSNQLSGQIPSQFSGLTKLGVLDLSHNNLSGNLNSLSDLQNLVSLNVSFNDFSGELPDTPFFKRLPLSDLTANKGLYIAGAGVLTPADGVGPMKSHARTAMKFILSILLTLSTILALLTVYAFIRSHITNRAIMEEDNAWEMTLYQKLELSSIDDVIKGLTSSNVIGTGSSGVVYRVTIPNGETLAVKKMWSSEESGAFDSEIRTLGSIRHKNIVRLLGWGSNRKLKLLFYDYLPNGSLSSMLHGSGKGGAEWETRYEVVVGVAHALAYLHHDCVPAILHGDVKAMNVLLGDGLQAYLADFGLARVVSGNGGGGDGDGDGEGEDSKPVQRPYLAGSYGYMAPEHASMQLRITEKSDVYSFGVVLLEVLTGRHPLDPTLPAGAHMVQWVRNHLASRGDPSHILDPNLRGRADPTMHEMLQTLAVSFLCVSTKPDDRPTMKDVVAMLKEIRPLEASRVMDSDGLKKASSGVLSSSSPYPIIPPPNNKGLVSQYGSSNCSFNFSDDSI 1123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2068 1123 SUPERFAMILY Protein kinase-like (PK-like) 768 1078 IPR011009 -
Sto9g2068 1123 ProSitePatterns Serine/Threonine protein kinases active-site signature. 896 908 IPR008271 GO:0004672|GO:0006468
Sto9g2068 1123 Gene3D Ribonuclease Inhibitor 153 233 IPR032675 -
Sto9g2068 1123 Gene3D Ribonuclease Inhibitor 41 152 IPR032675 -
Sto9g2068 1123 Gene3D Ribonuclease Inhibitor 615 699 IPR032675 -
Sto9g2068 1123 Gene3D Ribonuclease Inhibitor 234 340 IPR032675 -
Sto9g2068 1123 Gene3D Ribonuclease Inhibitor 435 535 IPR032675 -
Sto9g2068 1123 Pfam Leucine rich repeat N-terminal domain 40 80 IPR013210 -
Sto9g2068 1123 Gene3D Phosphorylase Kinase; domain 1 741 851 - -
Sto9g2068 1123 ProSitePatterns Protein kinases ATP-binding region signature. 784 807 IPR017441 GO:0005524
Sto9g2068 1123 Pfam Leucine rich repeat 301 360 IPR001611 GO:0005515
Sto9g2068 1123 Pfam Leucine rich repeat 615 670 IPR001611 GO:0005515
Sto9g2068 1123 ProSiteProfiles Leucine-rich repeat profile. 636 658 IPR001611 GO:0005515
Sto9g2068 1123 Pfam Protein kinase domain 781 1060 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2068 1123 Gene3D Ribonuclease Inhibitor 341 434 IPR032675 -
Sto9g2068 1123 SMART LRR_typ_2 443 467 IPR003591 -
Sto9g2068 1123 SMART LRR_typ_2 178 202 IPR003591 -
Sto9g2068 1123 SMART LRR_typ_2 347 371 IPR003591 -
Sto9g2068 1123 SMART LRR_typ_2 634 657 IPR003591 -
Sto9g2068 1123 SMART LRR_typ_2 299 323 IPR003591 -
Sto9g2068 1123 SMART LRR_typ_2 106 130 IPR003591 -
Sto9g2068 1123 SMART LRR_typ_2 609 633 IPR003591 -
Sto9g2068 1123 SMART LRR_typ_2 154 177 IPR003591 -
Sto9g2068 1123 SMART LRR_typ_2 561 585 IPR003591 -
Sto9g2068 1123 SMART LRR_typ_2 491 515 IPR003591 -
Sto9g2068 1123 SUPERFAMILY L domain-like 39 313 - -
Sto9g2068 1123 SUPERFAMILY RNI-like 292 662 - -
Sto9g2068 1123 SMART serkin_6 778 1063 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2068 1123 Gene3D Transferase(Phosphotransferase) domain 1 852 1084 - -
Sto9g2068 1123 Gene3D Ribonuclease Inhibitor 536 614 IPR032675 -
Sto9g2068 1123 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 5 1079 - -
Sto9g2068 1123 PRINTS Leucine-rich repeat signature 422 435 - -
Sto9g2068 1123 PRINTS Leucine-rich repeat signature 634 647 - -
Sto9g2068 1123 ProSiteProfiles Protein kinase domain profile. 778 1070 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2068 1123 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 5 1079 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2068 Sto-Chr9 24601231 24605056 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2068 36 1123 Receptor kinase-like Gene Family AT5G56040 66.575 0.0 1434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto9g2068 Pkinase 2.2e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2068 - - gmx:100802880 1598.95