Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2060 ATGAATAAGTACATTATGTGGAGAGACTTGGAGGTGGGTGAGATTGAAGGCAAGTCAAATTGGGGTGATCAAATTATTATAGTTCGTCAAGATGGACTTGGAAATTCAACCACTGTTCAAGGAGCTGTGAATTTAGTGCCTTATGGCAACACAAAAAGAATCAAAATCCTTATTTATCCTGGAATTTACAGGGAGAAAGTATACGTGCCGAGAGGCAAGTCATGTATTTCATTCATAGGAAAAGAAGGCGAGACAGAGAATGAAGTACCTATCATTACAAATAATACCAAAGCTTCAAACATCGGTTCAAACGGACAAGAACTTGGCACCAACAATACATACACGGTATTTGTACAAGCAGACTATTTTTGTGCAACTTCAATAACCATTGAGAATAATGCAGTTCCAGATGGAAAAGGAGATCAAGGAGTGGCATTAAGGATGGACGGTGATAAAGCTATGTTATACAGAGAGTGTACATTGAACTCAacaagaagaggaggagcaatAGCAGCACATGAAAGGGAAGAGAATGATGAGACAGGATTTTCCTTTGTAGGATGCAAAATCCAAGGATTAGGACCAACTCTTCTTGGAAGAGCATGGGGAAACCATTCAAGAATAGTATATTCATACTGCACCATGGATGATATCATTCACCCTCTGGGTTGGAATGATTGGGGTGATCCCTCTAGACAAAAGACTTCAATGTTTGGGGAGTACAGGTGTGAGGGAGAAGGATCAAACAGAAGTGggaggacaaaatggtcattttcttTGAAGGATGAGGAAGCTATGCAATTTCTAGGCAGAGCCTTCATCAAAGGATACACCTGGCTTGCACTTTGa 849 0.3828 MNKYIMWRDLEVGEIEGKSNWGDQIIIVRQDGLGNSTTVQGAVNLVPYGNTKRIKILIYPGIYREKVYVPRGKSCISFIGKEGETENEVPIITNNTKASNIGSNGQELGTNNTYTVFVQADYFCATSITIENNAVPDGKGDQGVALRMDGDKAMLYRECTLNSTRRGGAIAAHEREENDETGFSFVGCKIQGLGPTLLGRAWGNHSRIVYSYCTMDDIIHPLGWNDWGDPSRQKTSMFGEYRCEGEGSNRSGRTKWSFSLKDEEAMQFLGRAFIKGYTWLAL 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2060 282 PANTHER PECTINESTERASE QRT1 2 157 - -
Sto9g2060 282 PANTHER PECTINESTERASE QRT1 155 281 - -
Sto9g2060 282 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 155 281 - -
Sto9g2060 282 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 2 157 - -
Sto9g2060 282 SUPERFAMILY Pectin lyase-like 24 280 IPR011050 -
Sto9g2060 282 Pfam Pectinesterase 169 276 IPR000070 GO:0030599|GO:0042545
Sto9g2060 282 Pfam Pectinesterase 26 162 IPR000070 GO:0030599|GO:0042545
Sto9g2060 282 Gene3D - 14 154 IPR012334 -
Sto9g2060 282 Gene3D - 155 282 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2060 Sto-Chr9 24543622 24546125 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2060 1 234 Carbohydrate Esterase AT5G55590 42.333 6.25e-69 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2060 K01051 - gmx:100775690 302.753