Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2056 ATGCAGATAGCAGGAAGCAATGGGTTTGGTCACAGCATAGAGTTCATGTCTCAGGCTTACCTTATGAATAATAATAGGTACTCTGAGATTGACATTCACCTTCAAGATGACATTCCTAACCAACAACGTCCTCTTCCTATTTTTCTCAAGTTTGAAGATGTAGAATACAAAGTGAAAAACAGCAATGCAGCCTCCAATGTGAAGAAGATGGTGTCAAAGGTAGGCACACAAGTCAATGAAAACCAAGAGAGATACAAGAAAATCCTAAAGGGTATCACAGGAAGCATAGGCCCTGGTGAGATCCTTGCTCTCATGGGTCCTTCTGGCAGTGGCAAGACAACCTTGTTGAAAGTCATAGGAGGAAGATTATCTGAAAATGTCAAAGGAAATATCACTTACAATGATGTTGCATATAGTTCTGCTTTTAAGAGGAGAATTGGATTTGTGACACAAGAGGATGTGCTTTTCCCTCAACTAACAGTGGAAGAAACATTAGTATTCTCTGCATTCTTAAGGTTGCCTGCTAACATGAGCCAACAACAAAAATATGATAAAGTGGAGGCAACTCTAAAGGATCTAGGCCTTGAAAGATGTCGCCACACAAAAATAGGTGGAGGATTTATTAAAGGCATATCAGGAGGAGAAAGGAAGAGAACCAGCATAGGTTATGAAATTCTTGTGGATCCTTCACTACTACTTCTTGATGAACCAACTTCGGGCCTTGATTCCTCCTCAGCAAACAGACTCCTTCTCACTCTTCATGGACTTGCCAAGGCTGGAAGGACAATAATCACAACAATTCATCAGCCATCCAGCAGGATCTTTCACATGTTTGACAAACTACTTCTGATATCAGAAGGCTATCCAATTTACTATGGGAAGGCCAGAGATTCCATGGACTACTTCTCATCATTGAGATTCATCCCTGAAATACCGATGAATCCTGCAGAATTCTTGCTTGATTTGGCCACTGGACAAGTGAATGATATGAGCATTCCTCCAGATATTTTGGAATACCAAGAATCTACTGACCCTTCAAAAGCTGTTATCCAACAGCATCTACAACTCAAGTACAAGACTCTGCTAGAGccaaaggaaaaagaagagaacCATGGAGGAATAAAGACAGCAGAACATCTTCAAGTAGCTATTCAAGCTAAGAAGGAGTGGACATTGAGTTGGATGGAGCAATTCATGATTCTGTGTAAGAGAACATTCAGAGCAAGATGTAAGGACTACTTTGATAAGGTAAGACTAGTTCAAGCACTTGGAGTTGCACTCTTGTTGGGCCTTCTATGGTGGAAATCTTCAACTAATACCGAGGCTCAACTCAGAGATCAGGTTGGATTAATGTTCTATATCTGTATATTCTGGACATCTTCATGCATATTTGGAGCAGTGTATGTGTTTCCATTTGAGAAGGTGTATTtggtgaaagaaaggaaagcagATATGTACAGACTAAGTGTATACTACGCATGCAGTACTCTGTGCGACATGGTGGCACATGTTTTCTATCCGACATTTTTCATGCTCATTTTGTACTTCATGGCTGGCTTCAAGAGGACTGTCGCTTGCTTCTTCCTCACATTACTAGCTGTGCTGCTCATAGCAATCACTAGTCAAGGGGCAGGAGAACTATTTGGAGCAGCAGTGATGAGTATTCAAAGAGCAGGGATGGTTGCTTCTTTGATACTAATGTTATTCCTTCTCACTGGTGGCTACTATgtgcagCACATACCGGTGTTCATGAGGTGGCTGAAGTATCTATCGTTCATGTACTACGGCTTCAGGCTGCTGCTCAAAGTGCAGTACTCAGGCGACGAGATGTATGACTGCGAGAGCAAAGGAGGATGCAGGCCTCTCCAATCGTCTCCTTCCTTCGACACAGTGAATCTGAAAGGAGGCTTCAAAGAAGTTTGGGTTCTCTTCGCCATGGCTCTCTCCTTCCGTTTCTTCGCTTACCTTTGCCTCCGTAGGAGAATTGATCTCTGCAATCTCTGA 2004 0.4127 MQIAGSNGFGHSIEFMSQAYLMNNNRYSEIDIHLQDDIPNQQRPLPIFLKFEDVEYKVKNSNAASNVKKMVSKVGTQVNENQERYKKILKGITGSIGPGEILALMGPSGSGKTTLLKVIGGRLSENVKGNITYNDVAYSSAFKRRIGFVTQEDVLFPQLTVEETLVFSAFLRLPANMSQQQKYDKVEATLKDLGLERCRHTKIGGGFIKGISGGERKRTSIGYEILVDPSLLLLDEPTSGLDSSSANRLLLTLHGLAKAGRTIITTIHQPSSRIFHMFDKLLLISEGYPIYYGKARDSMDYFSSLRFIPEIPMNPAEFLLDLATGQVNDMSIPPDILEYQESTDPSKAVIQQHLQLKYKTLLEPKEKEENHGGIKTAEHLQVAIQAKKEWTLSWMEQFMILCKRTFRARCKDYFDKVRLVQALGVALLLGLLWWKSSTNTEAQLRDQVGLMFYICIFWTSSCIFGAVYVFPFEKVYLVKERKADMYRLSVYYACSTLCDMVAHVFYPTFFMLILYFMAGFKRTVACFFLTLLAVLLIAITSQGAGELFGAAVMSIQRAGMVASLILMLFLLTGGYYVQHIPVFMRWLKYLSFMYYGFRLLLKVQYSGDEMYDCESKGGCRPLQSSPSFDTVNLKGGFKEVWVLFAMALSFRFFAYLCLRRRIDLCNL 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2056 667 CDD ABCG_EPDR 46 293 - -
Sto9g2056 667 Pfam ABC transporter 89 239 IPR003439 GO:0005524
Sto9g2056 667 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 86 304 IPR027417 -
Sto9g2056 667 SMART AAA_5 98 289 IPR003593 -
Sto9g2056 667 Pfam ABC-2 type transporter 396 605 IPR013525 GO:0016020|GO:0140359
Sto9g2056 667 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 49 311 IPR003439 GO:0005524
Sto9g2056 667 Pfam ABC-2 type transporter 268 328 IPR043926 GO:0140359
Sto9g2056 667 Gene3D - 70 305 IPR027417 -
Sto9g2056 667 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 1 662 - -
Sto9g2056 667 PANTHER ABC TRANSPORTER G FAMILY MEMBER 26 1 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2056 Sto-Chr9 24517804 24521984 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2056 87 272 Calmodulin-binding Proteins AT2G36910 29.319 1.23e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2056 K05681 - zju:107416341 1071.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2056 9 24517804 24521984 Sto9g2056 9 24517804 24521984 ECH