Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2049 ATGATGAACCAAATGATGTATTCTGACATAAATTCTCAAATTGGGAGTTGCATGCCACTTTCTTCAATGCGAATTGGAACAATCATTCACAACATTGAGCTGAACCCAGGGCAAGGTGGAAAACTGGTCCGAGCAGCTGGAACGAGTGCAAAGATATTGAAAGAGCCCGCTTCAAGATACTGTTTAATCCAACTTCCTTCGGGTGTGAAAAAGTTGATTGATTCTCGTTGCAGGGCCACAATTGGTACTGTATCTAATCCAACCCATGCAGATCGGAAGCTTGGGAAGGCTGGGCGGAGCCGATGGCTCGGTCGAAGGCCGGTAGTTCGAGGAGTGGCCATGAATCCAGTAGATCATCCTCATGGTGGAGGAGAGGGTAAGAGCAAGAGTAGTGGAAAGTTTGGGAGAGAGTCTTGTACTCCTTGGGGCAAACCAACTAAGTGTGGATACAAGACTGGCCCACTAAAGCGCAAAAAGTAG 480 0.4729 MMNQMMYSDINSQIGSCMPLSSMRIGTIIHNIELNPGQGGKLVRAAGTSAKILKEPASRYCLIQLPSGVKKLIDSRCRATIGTVSNPTHADRKLGKAGRSRWLGRRPVVRGVAMNPVDHPHGGGEGKSKSSGKFGRESCTPWGKPTKCGYKTGPLKRKK 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2049 159 MobiDBLite consensus disorder prediction 113 159 - -
Sto9g2049 159 Pfam Ribosomal Proteins L2, C-terminal domain 13 143 IPR022669 GO:0003735|GO:0005840|GO:0006412
Sto9g2049 159 Gene3D Ribosomal protein L2, domain 3 85 159 IPR014726 -
Sto9g2049 159 PANTHER 39S RIBOSOMAL PROTEIN L2, MITOCHONDRIAL 8 158 - -
Sto9g2049 159 Gene3D - 8 84 IPR014722 -
Sto9g2049 159 TIGRFAM rplB_bact: ribosomal protein uL2 9 157 IPR005880 GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740
Sto9g2049 159 ProSitePatterns Ribosomal protein L2 signature. 107 118 IPR022671 GO:0003735|GO:0005840|GO:0006412
Sto9g2049 159 SUPERFAMILY Translation proteins SH3-like domain 14 151 IPR008991 -
Sto9g2049 159 PANTHER RIBOSOMAL PROTEIN L2 8 158 IPR002171 GO:0003735|GO:0005840|GO:0006412
Sto9g2049 159 SMART Ribosomal_L2_C_2 12 145 IPR022669 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2049 Sto-Chr9 24471628 24472107 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2049 4 124 Cytoplasmic Ribosomal Protein Gene Family AT3G51190 43.411 1.59e-24 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2049 - - lang:109347761 283.108