Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2035 atgtggAGGTTGAAGATAGGAGGAGATGGAAAGAAGAATCCTTACATTTTCAGTACTAATAACTTCGTGGGAAGACAGACATGGGAGTTTGATGCTGAAGGAGGAAGCCATGAAGAGAGGTCAGAGGTTGAAGCTGCTCGTCATAACTTCTATGCCAATCGATTCCATAACAAAGCTTGTGCTGATCTTTTATGGCGATTTCagATACTTGGTGTATTTGAATGGTCTGGAAACAATCCAATGCCTCCTGAATTTTGGCTCTTTCCTTCGTTTCTTCCTATGCATCCAGACCCAAATGGAGATGCCTTTAAAAAACACCTTGCAAGGATTCCTGATTATTTATGGATTTCAGAAGATGGAATGACTATGCAGAGCTTTGGTAGCCAAAGCTGGGATGCTGGCCTTGTTATTCAAGCTTTGCTTGCAACTGAACTAATTGAGGAAATTGCTCCTACACTTGCAAGAGCACATTATTTCATCAAGGAATCacagGTTAAGGACAACCCTTCTGGTGACTTTAAGAGCATGTTTCGTCACATTTCTAAAGGGTCATGGACTTTCTCTGATCAAGATCACGGATGGCAACTTTCTGATGGCACGGCAGAAGCTTTAAagTGTTGTCTCCTTTTATCCAAGTTGCCACCAGAGCTTGTGGGTGAAAAGATGGAACCTGAAAGGTTATATGATGctgttaatatattattatcatttCAAgtgttgAACCCTTTAGAATTTTTGGAGGAGATAGTACTTGAACGTGAATTTGTTGAATGCACTGGGTCGTCAATTCAAGCACTAATTTTATTTAGTGAGCAATATCCAGAGCATAGGAAGAAAGAGATTGAGAAATTCATTGGTAAAGCTATAAAATATCTTGAAGATACTCAAAAAGATGATGGTTCATGGTATGGGAATTGGGGAGTTTGCTTCATTTATGGTACTTTTTTTGCACTTGGTGGGCTTGCTGCTGCTGGTAAGACTTATGACAATTGTGATACCATTCGCAAAGCTGTTCATTTTCTACTCACAACACAATgcTTCAATTTCCTGAAGGCAGAGGACGAAGGCGGAGACAGGGGAACTCCGACTCCGACTCACCCGAACAACAACACCGGCGACCCACACGCCGCCGTCTCCGCCGCCGACGACCAGCCGCAGCAGCGCGTGCAGGTCCGAGAGCAAGATCAGTACATGCCGATAGCAAACGTGATCAGAATCATGCGCCGGATTCTTCCCCCGCACGGCAAGATCTCGGACGACGCTAAGGAGACAGTCCAAGAGTGCGTGTCGGAGTTCATAAGCTTCATCACCAGTGAAGCTAATCAACGCTGCCGCCACGAGCAGCGCAAGACCGTCACGGCGGAGGATCTGCTCTGGGCGATCGGACGGCTCGGATTCGACGACTACGTCGGTCcgctctctctcttcctcgcTCGCTACCGTGACTTCGACGGTAACGGAAACGGTAACCGCTCTGCCTCCGCCTCTGCCTCCTCCGCCGCGTCGGCCGTCGTACGCGGGCAGCGCTTGATGATCGCTCCGCCGCACTTTGCGCCCCCGGCTCCAGCAGCGCCTCCTGCGCCTCTTGCGCGGCAGCATTATGGGGCGGGTTATCCGGAGGGTCCGTATCCAATGGGCGGGTACTACATGGGCAACGGGTCGGGTTCGGGCAGCTCCAGTGGGAGTCCGGCGAACTATGATCCATACCATCGTTATTGA 1719 0.4718 MWRLKIGGDGKKNPYIFSTNNFVGRQTWEFDAEGGSHEERSEVEAARHNFYANRFHNKACADLLWRFQILGVFEWSGNNPMPPEFWLFPSFLPMHPDPNGDAFKKHLARIPDYLWISEDGMTMQSFGSQSWDAGLVIQALLATELIEEIAPTLARAHYFIKESQVKDNPSGDFKSMFRHISKGSWTFSDQDHGWQLSDGTAEALKCCLLLSKLPPELVGEKMEPERLYDAVNILLSFQVLNPLEFLEEIVLEREFVECTGSSIQALILFSEQYPEHRKKEIEKFIGKAIKYLEDTQKDDGSWYGNWGVCFIYGTFFALGGLAAAGKTYDNCDTIRKAVHFLLTTQCFNFLKAEDEGGDRGTPTPTHPNNNTGDPHAAVSAADDQPQQRVQVREQDQYMPIANVIRIMRRILPPHGKISDDAKETVQECVSEFISFITSEANQRCRHEQRKTVTAEDLLWAIGRLGFDDYVGPLSLFLARYRDFDGNGNGNRSASASASSAASAVVRGQRLMIAPPHFAPPAPAAPPAPLARQHYGAGYPEGPYPMGGYYMGNGSGSGSSSGSPANYDPYHRY 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2035 572 PANTHER TERPENE CYCLASE/MUTASE FAMILY MEMBER 97 346 IPR018333 GO:0005811|GO:0016104|GO:0016866
Sto9g2035 572 PANTHER TERPENE CYCLASE/MUTASE FAMILY MEMBER 68 96 IPR018333 GO:0005811|GO:0016104|GO:0016866
Sto9g2035 572 PANTHER TERPENE CYCLASE/MUTASE FAMILY MEMBER 1 70 IPR018333 GO:0005811|GO:0016104|GO:0016866
Sto9g2035 572 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 398 461 IPR003958 -
Sto9g2035 572 SUPERFAMILY Histone-fold 394 498 IPR009072 GO:0046982
Sto9g2035 572 MobiDBLite consensus disorder prediction 355 384 - -
Sto9g2035 572 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 26 97 IPR008930 -
Sto9g2035 572 ProSitePatterns Terpene synthases signature. 299 313 IPR002365 GO:0016866
Sto9g2035 572 Gene3D Histone, subunit A 385 510 IPR009072 GO:0046982
Sto9g2035 572 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 101 351 IPR008930 -
Sto9g2035 572 Pfam Squalene-hopene cyclase C-terminal domain 276 345 IPR032696 -
Sto9g2035 572 Gene3D - 63 100 - -
Sto9g2035 572 Gene3D - 102 381 - -
Sto9g2035 572 PANTHER LUPEOL SYNTHASE 1 68 96 - -
Sto9g2035 572 PANTHER LUPEOL SYNTHASE 1 1 70 - -
Sto9g2035 572 PANTHER LUPEOL SYNTHASE 1 97 346 - -
Sto9g2035 572 PRINTS CCAAT-binding transcription factor subunit A signature 425 443 - -
Sto9g2035 572 PRINTS CCAAT-binding transcription factor subunit A signature 444 462 - -
Sto9g2035 572 PRINTS CCAAT-binding transcription factor subunit A signature 463 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2035 Sto-Chr9 24334576 24347235 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2035 386 534 CCAAT-HAP3 Transcription Factor Family AT5G47670 54.362 2.72e-49 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Sto9g2035 SQHop_cyclase_C 1.8e-15 CL0059
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2035 K15813 - fve:101290872 391.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2035 9 24334576 24347235 Sto9g2035 9 24334576 24347235 ECH