Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2025 ATGGCGGACTCGGACAACGATTCGGGAGGCGCGCCGAACATGGGAGCGAATGCGAACAGCGAGTTGTCGCCGCGGGAGCAGGACCGGTTCCTGCCGATAGCGAACGTGAGCAGAATCATGAAGAAGGCGCTGCCGGCGAACGCGAAGATCTCGAAGGACGCGAAGGAGACGGTGCAGGAGTGCGTGTCGGAGTTCATCAGCTTCATCACCGGAGAGGCGTCGGACAAGTGCCAGAGGGAGAAGCGGAAGACCATCAACGGGGACGACTTGCTGTGGGCGATGACGACGTTGGGATTCGAGGACTACGTGGAGCCCCTCAAGATATACTTGCACAGGTTCAGAGAAATGGAGGGAGAGAAGAGCGCCGTGGCGGCGCGTGACAAGGACGGGGTAGGCGCTGCGAGTGGTGGGTAcgaaggaggaggaggtggtggtggtgggatgTATGGGAGTGGTGGAATGGGGATGATGATGCATCAGGGACACGTGTACGGCTCTGGTGGGTTTCATCAAATGGGTGGGAGTGGGAGTCCTGTTATGGGATCTAATGCGGGTAGGCCCAGGTAG 567 0.5626 MADSDNDSGGAPNMGANANSELSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKIYLHRFREMEGEKSAVAARDKDGVGAASGGYEGGGGGGGGMYGSGGMGMMMHQGHVYGSGGFHQMGGSGSPVMGSNAGRPR 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2025 188 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 164 IPR027113 GO:0001228|GO:0006355|GO:0016602
Sto9g2025 188 ProSitePatterns NF-YB/HAP3 subunit signature. 61 77 IPR003956 GO:0005634|GO:0006355|GO:0043565
Sto9g2025 188 SUPERFAMILY Histone-fold 27 126 IPR009072 GO:0046982
Sto9g2025 188 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2 1 164 - -
Sto9g2025 188 PRINTS CCAAT-binding transcription factor subunit A signature 58 76 - -
Sto9g2025 188 PRINTS CCAAT-binding transcription factor subunit A signature 77 95 - -
Sto9g2025 188 PRINTS CCAAT-binding transcription factor subunit A signature 96 114 - -
Sto9g2025 188 MobiDBLite consensus disorder prediction 1 27 - -
Sto9g2025 188 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 30 94 IPR003958 -
Sto9g2025 188 MobiDBLite consensus disorder prediction 10 24 - -
Sto9g2025 188 Gene3D Histone, subunit A 18 135 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2025 Sto-Chr9 24197699 24198295 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2025 1 160 CCAAT-HAP3 Transcription Factor Family AT4G14540 76.250 3.40e-76 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Sto9g2025 CBFD_NFYB_HMF 1.7e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2025 K08065 - gmx:100813169 265.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2025 9 24197699 24198295 Sto9g2025 9 24197699 24198295 ECH