Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2018 ATGGGTACGGAGGGAATGCGATCGGAGCAAGAGGGTCGGCAGAATTTCACGGAGTTGTTAGGATTATCATCGATTTGGGGAGCGTTTGGCTTCCGAGAAAGTGCGTTTGGATTCCGGGAAAGTGCGTTGGGTTTGGTTATGGCTACCCTTGAAGCATGGAAGCAAGTAGCCATTGTTAAATTTGCAGATCGTGCTGCGAAGGTGGCAGAGACAATGACGACTATGGGGATATCTAAAGTTTCAATCTTTTCTGTTTTGGCTTTGTGGGTTTGTGTTCAAATGGATTTAGCAGTTGCTAGCTCTGTCTCTAGCAATGGCCATGTTCAGAAATACATTACTTGGAAGGATATGCGAGTAGATGAACAAAGGTTGATGATGGCGACGACGACATTGAAGTCCATTAAGGATGTTGGAGTTATTGTGGTTGACCAACATGGGAGTGGACATTCTAGGACTGTACAAGGAGCTGTGGATATGGTTCCAGAACACAACACACAAAGAGTCAAAATATACATTTACCCAGGAATTTACAGAGAAAAAGTGGTAGTGCCAAAGACGAAGGGATATGTGTCAATgataggaggaggaggaagaaatgGAACAGTAATTACTTGGAATAGTAAGTCATCTGATAGAGGTTTGGATGGTCAAATATTGGGCACTTATGCTTCTGCTACTGTCACTGTAGAAGCAGATTACTTCTGTGCAACTAAGCTCACTTTTGagAACTCTGTAGTTGCAGTGGGTGGTGGAAATGGAATGCAAGCAGTAGCATTGAGAGTGGACAGTGATAGAGCCATGTTCTATAGAGTTAGGATCAAGGGCTCACAAGACACTCTCTTAGACAACATTGGAAACCATTACTTCTACAAGTGTTTCATCCAAGGAAAAGTTGATTTTATATTTGGCAGTGCAAAGTCACTCTATCAGAAGTGTCGTCTCCAGTCAATAGCTGAGAACTATGGAGCAATTGCAGCTCATCATAGGGATTTACCACAAGAAGATTCAGGATTTTCCTTTGTAGGATGCACAATCAAAGGCACTGGTAGTGTCTACCTTGGGAGAGCTTGGGGGAACTATTCAAGAGTAATTTACTCAAAGTGTCTTATGGATGATATTATTATCCCACAAGGATGGACCGAATGGAATCACCCTTCTAGAAAGAAGACTGCTGTGTTTGGGGAGTACCAATGCCAGGGAAGAGGAGCAGATAGAAGAGGAAGGGTGAAATGGTCAAAATCTTTGAGTTATGAGGAAGCAAGGCCATTCTTGAGTAAGAGTTTTATATATGGGGACAAGTGGCTTAAACTATAG 1314 0.4178 MGTEGMRSEQEGRQNFTELLGLSSIWGAFGFRESAFGFRESALGLVMATLEAWKQVAIVKFADRAAKVAETMTTMGISKVSIFSVLALWVCVQMDLAVASSVSSNGHVQKYITWKDMRVDEQRLMMATTTLKSIKDVGVIVVDQHGSGHSRTVQGAVDMVPEHNTQRVKIYIYPGIYREKVVVPKTKGYVSMIGGGGRNGTVITWNSKSSDRGLDGQILGTYASATVTVEADYFCATKLTFENSVVAVGGGNGMQAVALRVDSDRAMFYRVRIKGSQDTLLDNIGNHYFYKCFIQGKVDFIFGSAKSLYQKCRLQSIAENYGAIAAHHRDLPQEDSGFSFVGCTIKGTGSVYLGRAWGNYSRVIYSKCLMDDIIIPQGWTEWNHPSRKKTAVFGEYQCQGRGADRRGRVKWSKSLSYEEARPFLSKSFIYGDKWLKL 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2018 437 Gene3D - 137 437 IPR012334 -
Sto9g2018 437 PANTHER PECTINESTERASE QRT1 98 437 - -
Sto9g2018 437 SUPERFAMILY Pectin lyase-like 139 436 IPR011050 -
Sto9g2018 437 Pfam Pectinesterase 140 432 IPR000070 GO:0030599|GO:0042545
Sto9g2018 437 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 98 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2018 Sto-Chr9 24156097 24161726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2018 79 389 Carbohydrate Esterase AT5G55590 54.381 3.66e-127 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2018 K01051 - gmx:100813382 496.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2018 9 24156097 24161726 Sto9g2018 9 24156097 24161726 ECH