Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2011 ATGGGCTTCAAGTGTTCGGGCAGGAAGTTCTTGGCTAGGCCTCAGCATGAAGGTGTTGGGGCTGTTGTTAGGAGAAGTATTGGACGGTTTGAGCTGAAGTACTTTGATCCATTCCTAGTCCTGGATGAATTCTCCGTCACTGCCCCTGCTGGCTTCCCTGATCATCCACATAGAGGATTTGAGACAGTCACATACATGTTGCAGGGAGCTGTGACGCATGAAGATTTTGAAGGACACAAGGGAACAATAGAAGCTGGTGATTTGCAGTGGATGACTGCAGGGAGAGGCATAGTTCACTCAGAGATGCCTGCATCTCAAGGAACACAGAAGGGCCTGCAGCTTTGGATCAACCTCTCTTCCAAATATAAAATGATGGAACCAAGGTATCAAGAAATGCTGAGTAAGGACATAGCAGAAGGTGTGGAAGATGGAATCAAGGTGAGAGTAATAGCAGGGGAAGCCTTAGGAATAAAGTCTCCAATCCAAACAAAGACTCCAACCATGTACTTGGACTTCACTCTCAAACCAGGATCTCACTTGCAACAACCCATACCAAAGTCATGGAATGCCTTTGCCTATGTGTTGGAAGGAGAGGGCGTGTTTGGCAACCCCAAATCTCAGCCTGCAAATTCCCACCATATTCTTCTTCTTGGTGCTGGGGATGGCTTGGAGGTGTGGAATAAGAGTTCTAATAAGGTGCTTAGGTTCATTTTGGTTGGAGGTGAACCATTGGGTGAGCCTTTGGTGCAGTTTGGACCCTTTGTGATGAACACACAAGAAGAGATTGACCAAACCATTAGTGATTTTGAGAACTGTGTGAATGGGTTTGAGAAAGCTAGACATTGGAGATCTGAAGCTGCTGTTGGTCTAGACTTTTGA 879 0.4619 MGFKCSGRKFLARPQHEGVGAVVRRSIGRFELKYFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLQGAVTHEDFEGHKGTIEAGDLQWMTAGRGIVHSEMPASQGTQKGLQLWINLSSKYKMMEPRYQEMLSKDIAEGVEDGIKVRVIAGEALGIKSPIQTKTPTMYLDFTLKPGSHLQQPIPKSWNAFAYVLEGEGVFGNPKSQPANSHHILLLGAGDGLEVWNKSSNKVLRFILVGGEPLGEPLVQFGPFVMNTQEEIDQTISDFENCVNGFEKARHWRSEAAVGLDF 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2011 292 CDD cupin_pirin_N 21 118 - -
Sto9g2011 292 Gene3D Jelly Rolls 17 270 IPR014710 -
Sto9g2011 292 PANTHER - 7 289 - -
Sto9g2011 292 SUPERFAMILY RmlC-like cupins 9 284 IPR011051 -
Sto9g2011 292 PANTHER PIRIN-RELATED 7 289 IPR012093 -
Sto9g2011 292 PIRSF Pirin 6 283 IPR012093 -
Sto9g2011 292 Pfam Pirin C-terminal cupin domain 169 274 IPR008778 -
Sto9g2011 292 Pfam Pirin 23 116 IPR003829 -
Sto9g2011 292 Gene3D Jelly Rolls 138 244 IPR014710 -
Sto9g2011 292 CDD cupin_pirin_C 166 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2011 Sto-Chr9 24117685 24122120 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2011 8 280 Calmodulin-binding Proteins AT3G59220 58.759 1.48e-122 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2011 K06911 - gmx:100790637 531.561