Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1998 ATGCAAATCACAAGATGCTTCAGCTTCACTGTGTTTTTAAGAAAGAACctgtttttccttcttcttcttcctttcttcatCATGGTGTGTGCAGAAGGTGAGTCTTTAGAATCTGAGCCTTTCTTCAATTTCATTAGAGCCATTGATCCACAAAATGTGCTTAACATAAGCTGGATCAGTAATGGGTCAGCTTCATCAAATCCCTGCAAGCTTAAGTTAAATGGTGTGAGATGCAACTCAAAAGACATCAATATTATAGAGATAAGGTTAGAAAGATTGAACCTTAGTGGAACTATAGATGCAGATTCTCTGTGCAGGCTCAAAAAGATGAGAACTTTAAGCTTAGCTGAGAATAGTATCAGAGGAAATATTCCAAACTCTATTTTTCACTGTACAATGTTGAGTTATTTGAATCTAACAAGCAATCAATTGAGTGGGAGGATACCTAGAGGTTTAATGAAACTGAAATTTCTAAGGAAATTGGACATCTCAAACAACAAATTTTCTGGGGTCATCCAAAATCAACAAGAACATAGGTCAGAgagtgataataataataataatatgaacaCCAGAGTGGTGCTACTGGAAGATGATAAACTGTCACCAACAGCAAATCCTCTTCCAACTAGTAGCAACACTAGATCAGGATTCAAAATCACACTCCCATTACTTTTGGGCTTTGGATTGCTGTTGTTATTGTTGTCCCTTTTCTTAGTGGGAAGGAAGCTTGGAAAACTAAGTGCAAAGAGTGGGAATGCATTGAAGAACCATACAGAGTCTCAGATGAGAAAGGCTCCAAATGAGGTtacagaacaagaagaagatgagAAGCTGAAGGAAAGAGACACAGAACTTGTGTTCTTTGTCGAAGAGCACGAAAGGTTTACACTGGAGGACCTGCTTCAAGCAACGGCTGACTTAAGAAGTGAAAGCTTCTGCAGCAGCCTCTACAAGGTAAAACTGAAGAATGATGTCCATTATGCAGTCAAGAGATTAAAGAATTTGCAAGTATCCTCTGATGACTTCAGCAAAACACTGAGGCAAATAAGTAACTTTAAACATCCCAATATCCTTCCCCTTGTTGGTTACCGTTCAACAAGTGAAGAGAAGCTCATCATTTACAAATATCAAAGCAATGGAAGTCTGCTAAATCTTTTTGAGGATTATCTTGGAGGTAAAAAGGATTTCCCATGGAAACTGAGGCTGCGTATAGCCTACGGGATTGCTAGGGGTTTGGCATTCATATATCAGAAGGTGGATGAATGGGAGATAATTCCTCATGGAAATCTTAAGCTATCAAATATCCTTCTCAATGACAACAACGAACCACTAATAAGTGAGCATGGATTATTAAAATTCCTAGACCCAAATAGAGGCTTCCTCTTTTCTGCTCATGCATATACAGCTCCAGAGAAGAGTTTAACAGAAAAGGGTGATGTTTATAGCTTTGGAGTGATTCTCCTGGAACTACTAACAGGAAAAAGCATAGAAGTAACTAGAATAGACCTCACTAGATGGGTCAGATCCATGGTGAGTGAGGAATGGACAGGAGAGGTCTTTGACAAGGAGGTTAGAGAAGCTGAATACCAGTGGGCATTTCCTGTGCTAAATATAGCCTTCATGTGCGTATCGCGTCTCCCTGAGAATCGGCCAACCATGGAAGAGATTTTGGAGAAGATACAGGAGGTAATGAATGAACGAGAACAGCTAGACCGTGTCAATCAAAGATGCTGTGATGGATCCAACACTGAAAATTGTTGCTCACTTCACAAGATCATACCTGAAACATGGGATTCTCCAGGATCAAATTATTGA 1818 0.3801 MQITRCFSFTVFLRKNLFFLLLLPFFIMVCAEGESLESEPFFNFIRAIDPQNVLNISWISNGSASSNPCKLKLNGVRCNSKDINIIEIRLERLNLSGTIDADSLCRLKKMRTLSLAENSIRGNIPNSIFHCTMLSYLNLTSNQLSGRIPRGLMKLKFLRKLDISNNKFSGVIQNQQEHRSESDNNNNNMNTRVVLLEDDKLSPTANPLPTSSNTRSGFKITLPLLLGFGLLLLLLSLFLVGRKLGKLSAKSGNALKNHTESQMRKAPNEVTEQEEDEKLKERDTELVFFVEEHERFTLEDLLQATADLRSESFCSSLYKVKLKNDVHYAVKRLKNLQVSSDDFSKTLRQISNFKHPNILPLVGYRSTSEEKLIIYKYQSNGSLLNLFEDYLGGKKDFPWKLRLRIAYGIARGLAFIYQKVDEWEIIPHGNLKLSNILLNDNNEPLISEHGLLKFLDPNRGFLFSAHAYTAPEKSLTEKGDVYSFGVILLELLTGKSIEVTRIDLTRWVRSMVSEEWTGEVFDKEVREAEYQWAFPVLNIAFMCVSRLPENRPTMEEILEKIQEVMNEREQLDRVNQRCCDGSNTENCCSLHKIIPETWDSPGSNY 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1998 605 Pfam Protein tyrosine and serine/threonine kinase 320 560 IPR001245 GO:0004672|GO:0006468
Sto9g1998 605 Gene3D Phosphorylase Kinase; domain 1 268 377 - -
Sto9g1998 605 MobiDBLite consensus disorder prediction 255 277 - -
Sto9g1998 605 SUPERFAMILY Protein kinase-like (PK-like) 315 560 IPR011009 -
Sto9g1998 605 Coils Coil 554 577 - -
Sto9g1998 605 ProSiteProfiles Protein kinase domain profile. 302 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g1998 605 Pfam Leucine rich repeat 109 168 IPR001611 GO:0005515
Sto9g1998 605 Gene3D Ribonuclease Inhibitor 38 205 IPR032675 -
Sto9g1998 605 PANTHER TYROSINE KINASE FAMILY PROTEIN 19 598 - -
Sto9g1998 605 MobiDBLite consensus disorder prediction 262 277 - -
Sto9g1998 605 PANTHER OS05G0588300 PROTEIN 19 598 - -
Sto9g1998 605 SUPERFAMILY L domain-like 85 173 - -
Sto9g1998 605 Gene3D Transferase(Phosphotransferase) domain 1 379 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1998 Sto-Chr9 24022998 24025141 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1998 20 568 Receptor kinase-like Gene Family AT5G53320 31.525 4.86e-69 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sto9g1998 PK_Tyr_Ser-Thr 1.4e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1998 - - gmx:100807491 728.783