Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1994 ATGGACGCCGCTATCAATTCTTCCCAACCGCCCGGCTCGGCTTCGGGGCTTCGGCTCCACGAAGCCGCATCCGCCGATCCGAATCGTCGTCTCGGGTCATGGCAGAGCTCAGACGACGGCGTCGTCTCTTCTCGCGGCGCACGCTACAAGCTCATGTCGCCTGCTAGCCTTCCGATCTCCAGGTCCCCCTGCATCACGATTCCGCCCGGCCTCAGTCCGACGTCGTTTCTCGAGTCCCCGGTGCTTCTGTCCAACGTCAAGGTGGAGCCTTCGCCAACTACTGGATCCCTTACTAAGCCTCAGTCTGTTCTTGGCTCTGTTGCTTCTACTACATATCCTGTAACCACTGTATGCTTCAATACCAATACTGTTGATGAAAGAATATCAAGCTTCTTTGAGTTTAATCCAAACAGTAGATCAAATATGGTTCCTACAGATTTCAACAGCCATGTGAATGAACCATCTATGCAAATAGAAGGTTCAGGTCAGGCTCAGTCATCTGCTTTGTCACCATTAGTGAAAAGTGAGATAGCAGTGTCCTCAAATGAATTAAGTCTATCATCACCTGTTCAAATGGTTTGTTCAGTGGCTAGTGCTCCTGTTGAATCCAATTTGGATGAATCTAACCACAGAAGCAACATAGCCTCTGTTCTTCATTCTTCACAAGTTGAGGCTAAAGGCAGTGGTCTTTCAGTTTCCGCTGAGAGAATATCGGATGATGGATATAATTGGCGGAAATATGGACAGAAACATGTTAAAGGGAGTGAATTTCCAAGAAGCTATTACAAATGTACACACCCTAACTGTGAAGTGAAGAAGTTATTTGAACGTTCTCATGATGGGCAAATCACTGAGATAATTTACAAAGGATCACATGATCATCCTAAACCACAACCAAGTCGCCGATACTCAGCTGGTACTACTATGTCTATGCATGAAGAGAGATCTGATAAGGCTTCGTCTTTGTCTGGCCAAGATGCTAATATGTATGGTCATGTCTCTCACACTACTGAGCCCAACGGTGCTCCTGATCTATCTCCTGTAGCAGCAAATGATGATACTCTAGAGGGTGCAGGATTAGCTTCTAATAGGGCCAATGATgaagttgatgatgatgatcccTTCTCAAAGCGAAGGAAAATGGAGATTGGAAATGCTGAAATCACCCCTGTAATTAAACCTATTCGGGAACCACGTGTTGTTGTACAAACTCTGAGTGAGGTTGATATATTGGATGATGGGTATCGCTGGCGTAAGTATGGGCAGAAGGTGGTGAGAGGCAATCCTAACCCTAGGAGTTACTACAAATGCACAAATGCTGGCTGCCCTGTTAGAAAACACGTGGAGAGGGCATCTCATGATCCGAAAGCTGTAATAACCACATATGAGGGTAAGCACAATCATGATGTTCCTACTGCAAGGAATAGCAGCCATGATACAGCAGGACCAGCAGCTGCAGGTGTCCAGCCAAGAATAAGATCGGACGAAAGTGATACTATTAGCCTCGACCTTGGGATGGGAATCAGCCCAGCTGCTGAAAACAAATTGAATGGGCAAGGCCAAATGCTGCTATATGAATATGGGAACCGTCAAAATCACGCGGCTGGAAATTCCAATTTCAAGTTCCTTCATACGACCCCAGCGCCAGCTTACTTTGGTGTTCTAAATAATGGCTCAAATTCATATGTTTCTTCTAGAGAACATCTGAGTGATGCTCCATCTTTGAACCATTCCACCTATAGGTGCCCACAGAACATGGGAAGAATACTCACAGTTGGAGTTCATATGTACAGAAGTGAAGCTGATTTCAGAGTTGCTTCTATGTAA 1827 0.4516 MDAAINSSQPPGSASGLRLHEAASADPNRRLGSWQSSDDGVVSSRGARYKLMSPASLPISRSPCITIPPGLSPTSFLESPVLLSNVKVEPSPTTGSLTKPQSVLGSVASTTYPVTTVCFNTNTVDERISSFFEFNPNSRSNMVPTDFNSHVNEPSMQIEGSGQAQSSALSPLVKSEIAVSSNELSLSSPVQMVCSVASAPVESNLDESNHRSNIASVLHSSQVEAKGSGLSVSAERISDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGSHDHPKPQPSRRYSAGTTMSMHEERSDKASSLSGQDANMYGHVSHTTEPNGAPDLSPVAANDDTLEGAGLASNRANDEVDDDDPFSKRRKMEIGNAEITPVIKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARNSSHDTAGPAAAGVQPRIRSDESDTISLDLGMGISPAAENKLNGQGQMLLYEYGNRQNHAAGNSNFKFLHTTPAPAYFGVLNNGSNSYVSSREHLSDAPSLNHSTYRCPQNMGRILTVGVHMYRSEADFRVASM 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1994 608 SUPERFAMILY WRKY DNA-binding domain 235 297 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto9g1994 608 ProSiteProfiles WRKY domain profile. 233 297 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g1994 608 Gene3D WRKY domain 396 472 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto9g1994 608 Gene3D WRKY domain 228 298 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto9g1994 608 SUPERFAMILY WRKY DNA-binding domain 403 471 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto9g1994 608 MobiDBLite consensus disorder prediction 467 494 - -
Sto9g1994 608 MobiDBLite consensus disorder prediction 321 341 - -
Sto9g1994 608 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 42 572 IPR044810 GO:0003700
Sto9g1994 608 SMART WRKY_cls 411 470 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g1994 608 SMART WRKY_cls 238 296 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g1994 608 MobiDBLite consensus disorder prediction 287 380 - -
Sto9g1994 608 MobiDBLite consensus disorder prediction 1 41 - -
Sto9g1994 608 MobiDBLite consensus disorder prediction 365 380 - -
Sto9g1994 608 ProSiteProfiles WRKY domain profile. 406 471 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g1994 608 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 42 572 - -
Sto9g1994 608 Pfam WRKY DNA -binding domain 412 468 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g1994 608 Pfam WRKY DNA -binding domain 239 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1994 Sto-Chr9 23987578 23992796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1994 52 589 WRKY Transcription Factor Family AT4G26640 57.798 0.0 558
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto9g1994 WRKY 1.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1994 - - gmx:100781491 849.351