Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1954 ATGGCATCTTCTTCAGACTCATGGATGAAGGAATATAATGAAGCTGTGAAACTTGCTGATGATATCAGTGGCATGATTGCTGAACGGAGTTCATTTCCCTCATCTGGACCTGAAACCCAGCGTCATGCATCTGCTATAAGAAGGAAGATAACAATATTAGGGACCAGGCTTGATAGCTTGCAGTCTCTTTTGTCGAAGCTTCCTGGAAAGCAGCCCATATCTGACAAGGAGATGAATCGTCGCAAGGACATGCTTGCAAATTTGAGATCAAAAGTAAACCAGATGGCATCAGCATTGAACATGTCTAATTTTGCAAACAGGGATAGTTTGCTTGGGCCAGACATAAAACCAGCTGATGAAATGAGCAGAACGGTTGGCCTGGATAATAATGGGCTTGTTGGACTTCAACGACAAATTATGAGAGAGCAAGATGAAGGGCTTGAGAAATTGGAGCAGACTGTAACAAGTACAAAACATATTGCTTTGGCTGTGAATGAAGAACTGGATCTTCACACTAGACTCATTGATGACTTGGACCAGCATGTAGATGTTACAGATTCTCGGATGCGGCGGGTGCAGAAGAACTTGGCAATTTTGAATAAGCGTACTAAGGGTGGTTGTTCCTGCTTGTGCATGCTTTTATCAGTTGTTGGCATAGTGGTTTTGGTTGTTGTCATATGGTTGTTGGTCAAATATTTGTAA 702 0.4231 MASSSDSWMKEYNEAVKLADDISGMIAERSSFPSSGPETQRHASAIRRKITILGTRLDSLQSLLSKLPGKQPISDKEMNRRKDMLANLRSKVNQMASALNMSNFANRDSLLGPDIKPADEMSRTVGLDNNGLVGLQRQIMREQDEGLEKLEQTVTSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRMRRVQKNLAILNKRTKGGCSCLCMLLSVVGIVVLVVVIWLLVKYL 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1954 233 PANTHER SYNTAXIN 1 227 IPR045242 -
Sto9g1954 233 Gene3D - 139 201 - -
Sto9g1954 233 CDD SNARE_Qc 140 197 - -
Sto9g1954 233 SUPERFAMILY t-snare proteins 20 100 IPR010989 GO:0016020|GO:0016192
Sto9g1954 233 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 137 199 IPR000727 -
Sto9g1954 233 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 1 227 - -
Sto9g1954 233 SMART tSNARE_6 132 199 IPR000727 -
Sto9g1954 233 SUPERFAMILY SNARE fusion complex 128 198 - -
Sto9g1954 233 Pfam SNARE domain 174 225 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1954 Sto-Chr9 23714078 23715998 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1954 1 233 SNARE and Associated Proteins AT1G16240 75.107 3.46e-130 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1954 K08503 - rcu:8268133 379.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g1954 9 23714078 23715998 Sto9g1954 9 23714078 23715998 ECH