Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1953 atgtctGACCTAGACAGGCAAATAGAGCAGCTGAAGAAGTGCGAGCCTCTCAAGGAGTCGGAAGTGAAGGCCCTTTGTCTCAAGGCCATGGAAATTCTCGTCGAAGAGAGCAACGTTCAGAGGGTCGACGCCCCCGTCACCATTTGTGGTGATATCCACGGGCAATTTTATGACATGAAAGAGCTATTCAAAGTAGGAGGTGATTGCCCAAAAACAAACTATCTATTCCTTGGAGATTTTGTTGATAGAGGATTTTACTCAGTTGAAACATTTCTGCTTCTTCTGGCTCTAAAGGTATCTTATATTCTTCTCTTGCAAATGCTCATCCAGAAAATTGGGAATGTGAGGTATCCAGATCGCATAACACTCATTAGGGGGAACCATGAGAGCCGTCAAATCACACAGGTATATGGATTCTATGATGAGTGCCTCCGTAAATATGGATCGGTGAATGTTTGGAGATATTGCACTGATATATTCGACTATTTAAGCTTGTCCGCTCTcattgaaaacaagatttttagTGTTCATGGTGGTCTATCTCCTGCCATCTCAACATTGGATCAGATAAGGACTATTGACCGGAAGCAAGAAGTACCTCATGATGGTGCCATGTGTGACCTCTTATGGTCAGATCCTGAAGATATAGTAGATGGATGGGGTCTGAGTCCCCGTGGTGCTGGTTTCTTGTTCGGTGGTAGTGTTGTTACTTCTTTCAACCACTCCAATAACATTGACTATATATGTCGTGCACATCAGTTGGTCATGGAAGGATATAAATGGATGTTCGGTAACCAGATAGTTACTGTATGGTCAGCTCCAAATTATTGCTATAGATGTGGTAATGTAGCTGCAATCTTGGAGTTGGATGAAAATCTCAATAAGCAATTCCGTGTGTTTGATGCTgctccacagGAATCAAGAGGGGCACCTGCCAAAAAACCACCCCCAGATTACTTCCTATGA 966 0.4172 MSDLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVSYILLLQMLIQKIGNVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSDPEDIVDGWGLSPRGAGFLFGGSVVTSFNHSNNIDYICRAHQLVMEGYKWMFGNQIVTVWSAPNYCYRCGNVAAILELDENLNKQFRVFDAAPQESRGAPAKKPPPDYFL 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1953 321 PRINTS Serine/threonine phosphatase family signature 45 72 IPR006186 GO:0016787
Sto9g1953 321 PRINTS Serine/threonine phosphatase family signature 74 101 IPR006186 GO:0016787
Sto9g1953 321 PRINTS Serine/threonine phosphatase family signature 123 147 IPR006186 GO:0016787
Sto9g1953 321 PRINTS Serine/threonine phosphatase family signature 158 184 IPR006186 GO:0016787
Sto9g1953 321 PRINTS Serine/threonine phosphatase family signature 187 214 IPR006186 GO:0016787
Sto9g1953 321 PRINTS Serine/threonine phosphatase family signature 244 264 IPR006186 GO:0016787
Sto9g1953 321 PRINTS Serine/threonine phosphatase family signature 266 282 IPR006186 GO:0016787
Sto9g1953 321 SUPERFAMILY Metallo-dependent phosphatases 2 307 IPR029052 -
Sto9g1953 321 Gene3D - 1 313 IPR029052 -
Sto9g1953 321 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP-X ISOZYME 1 1 321 - -
Sto9g1953 321 Pfam Calcineurin-like phosphoesterase 45 253 IPR004843 GO:0016787
Sto9g1953 321 ProSitePatterns Serine/threonine specific protein phosphatases signature. 124 129 IPR006186 GO:0016787
Sto9g1953 321 CDD MPP_PP2A_PP4_PP6 3 304 - -
Sto9g1953 321 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 1 321 - -
Sto9g1953 321 SMART pp2a_7 17 304 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1953 Sto-Chr9 23703115 23708425 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1953 24 239 Calmodulin-binding Proteins AT5G63870 34.496 1.53e-32 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1953 K15423 - cit:102608319 620.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g1953 9 23703115 23708425 Sto9g1953 9 23703115 23708425 ECH