Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1944 ATGACTAGGCTTGCGAGAAGAAAGGTAGGTTTGAGGCGTATTGATGCTGCTCTGGATCATCTCAGTGCCATGGGCTTCCCCAGAGTTTTAGTGCGTAAAACTGTCAACAAGCTCCTTAAGGTGTATGATGGAGAATGGGTGTTCCTTGAAGAAGCATCATACAGAGTGGTTATCGAAGCAATTCTTGAAGAACAATACTCAAAACAAAACACTAAGCCAAAGTTGTCGGATCCTTCTCCATCCAAGAAGgTTATGAAATCGAAGATTGGTTCTGCAATAGGATCTAACTTTCGTGATGTTTCTGAAAGGATTAGCTATTCCCCACTATCAGATTCTTGTGGATGCTCTTTTATATCACCAAAAATGGTCACTACACAAGTAGTTCACTCTCAGTCTCCACATAATCAAACTCAAGCAGCAAGGACTAGTTCATATTCTCCTATTTCGGATCATCCCAATCCATCAGTGGATCCGGAACCATCAATCGAATCCGATCCATCAATATATCTAGAACCATTAGTCGAGTCGGAACTATCATTGTACTCAGAATCATCGGTCAATTTTGACCCATCAATCAAATCCGACCCATCAAGGGATCCTGAACCTTCAATAGATTCCAAACAATTTGATCCACTAATATATCCCGATCCATCAATAGAATCAGATCCTAGGTTCTCCGAGGTTGTGGGTAAGCACCAATCAAGCTCCGATCCCACTGATATGCTGAGTGTAAGCGTAGGGGCAAAAGTGGAAGCAATTATTGTGTTCGGAGACTCATCGGTGGACGCAGGGAATAACAACCATATTTGTACGATACTGAAGAGCAATTTCAGTCCCTACGGTCGTGATTTCTACGGTTCCGTACCCACCGGACGGTTCTCCAATGGGCGTCTGCCAAGTGACTTCATCTCAGAAGCTTTTGGGATAAAGCCTCTGATTCCTCCGTATTTGGATCCAAACTTTAATGTTTCTCATTTTGTGAATGGTGTTTGTTTTGCTTCTGCAGGTAGTGGCTTTGATAATCTTACATCTCATGTCCTATCGGTGATACCTCTATGGAAGCAACTAGAATACTACAAGGAATTCCAAGAAGAGCTCAATAACCATCTTGGGAAAGAGAAAGCAAAAGAGGTTGTGGGTGAATCATTACACCTTATAAGTGTAGGGACCAATGACTTTCTAGAAAACTTCTACATGCTTCCAAAGAGATCATCAGAATATTCAGTGGAAGAATACCAAAAGTTCTTGTTGGGAATTGCAGAGGAATTCATGGAAGAGCTCTATGGGATGGGAGCAAGAAAGATTTCAATAGTGGGGCTTCCTCCTATGGGGTGTTTGCCTTTGGAAAGAACCACAAATTTCATGTTTGGGAGTGAGTGTGTGGAAGAATACAACAATGTGGCCATAGATTTCAATGGCAAGTTGGAAGGTTTGGTGTTGGAGATGAATCAAAAGCTGCTTGGGATCCAATTGGTGTTTGCTAATCCTTATGATATCATATGGAACATCATTCAGAATCCAGGTGCTTTTGGATTTGAAGATGTGGAAAGAGCATGTTGTGGAACAGGATTATTTGAGATGAGCTACATGTGTGATGAGTTTAATCCATTCACTTGTTCGGATGCTAATGATTATGTGTTTTGGGATGCATTCCATCCCACTCAAAAAACTTATGCCATCATTGCTCATTATTTGTTCTACAATTATCTAATTCACTTCAACTAA 1725 0.411 MTRLARRKVGLRRIDAALDHLSAMGFPRVLVRKTVNKLLKVYDGEWVFLEEASYRVVIEAILEEQYSKQNTKPKLSDPSPSKKVMKSKIGSAIGSNFRDVSERISYSPLSDSCGCSFISPKMVTTQVVHSQSPHNQTQAARTSSYSPISDHPNPSVDPEPSIESDPSIYLEPLVESELSLYSESSVNFDPSIKSDPSRDPEPSIDSKQFDPLIYPDPSIESDPRFSEVVGKHQSSSDPTDMLSVSVGAKVEAIIVFGDSSVDAGNNNHICTILKSNFSPYGRDFYGSVPTGRFSNGRLPSDFISEAFGIKPLIPPYLDPNFNVSHFVNGVCFASAGSGFDNLTSHVLSVIPLWKQLEYYKEFQEELNNHLGKEKAKEVVGESLHLISVGTNDFLENFYMLPKRSSEYSVEEYQKFLLGIAEEFMEELYGMGARKISIVGLPPMGCLPLERTTNFMFGSECVEEYNNVAIDFNGKLEGLVLEMNQKLLGIQLVFANPYDIIWNIIQNPGAFGFEDVERACCGTGLFEMSYMCDEFNPFTCSDANDYVFWDAFHPTQKTYAIIAHYLFYNYLIHFN 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1944 574 Pfam Ubiquitin-binding WIYLD domain 8 65 IPR018848 GO:0018024
Sto9g1944 574 PANTHER ANTER-SPECIFIC PROLINE-RICH PROTEIN APG-LIKE 246 569 - -
Sto9g1944 574 MobiDBLite consensus disorder prediction 127 151 - -
Sto9g1944 574 PANTHER GDSL ESTERASE/LIPASE EXL3 246 569 - -
Sto9g1944 574 MobiDBLite consensus disorder prediction 127 165 - -
Sto9g1944 574 CDD SGNH_plant_lipase_like 252 569 IPR035669 -
Sto9g1944 574 Pfam GDSL-like Lipase/Acylhydrolase 253 565 IPR001087 GO:0016788
Sto9g1944 574 Gene3D SGNH hydrolase 241 569 IPR036514 -
Sto9g1944 574 SUPERFAMILY SGNH hydrolase 385 566 - -
Sto9g1944 574 MobiDBLite consensus disorder prediction 189 241 - -
Sto9g1944 574 Gene3D - 6 66 IPR043017 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1944 Sto-Chr9 23634904 23641277 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1944 245 565 Pollen Coat Proteome AT1G75910 33.642 2.08e-56 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1944 - - jre:108994018 488.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g1944 9 23634904 23641277 Sto9g1944 9 23634904 23641277 ECH