Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1933 ATGAGGCGGGGCAGAGGAGCCGCCGGTGTCAAACCGGCGGCGGCGGTTGAACTCAACGGATCCGGATCAAGGTCGATTTTAAAAGAGCCGAGGTACCGGGGCGTGAGGAAGAGACCGTGGGGTAGATTCGCCGCCGAGATCAGAGACCCGTTGAAGAAAGCGCGTGTCTGGCTCGGCACGTTCGACTCAGCCGAGGAAGCCGCGAGAGCCTACGACGCAGCCGCGAGAGCCCTCCGTGGACCCAAGGCCAAGACCAacttccctctctctccttcttcccTCTCGCCGTTCTGCTACCACACCGCAAACCCTAACGTCAACGACGACGTTTTGGATCACCGGTTGTACGCCTCCGCCGCCGCTAACAACCACGGCTTCCAAGATCACCAGATTCAGCGGCCGGCCACCAGTAGCATGAGCAGCACCTCCTACAGCGGGCCCCGGCCTCCGTCAACGGCGGCGACTCGGAGATATCCGCGATCTCCACCGTGTGTAAGAAAGAATGAAGAAAGGAATCGCGTTTCTATGGAATTTGGATCCCATGTGGCCTTTgcctaa 558 0.5717 MRRGRGAAGVKPAAAVELNGSGSRSILKEPRYRGVRKRPWGRFAAEIRDPLKKARVWLGTFDSAEEAARAYDAAARALRGPKAKTNFPLSPSSLSPFCYHTANPNVNDDVLDHRLYASAAANNHGFQDHQIQRPATSSMSSTSYSGPRPPSTAATRRYPRSPPCVRKNEERNRVSMEFGSHVAFA 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1933 185 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 7 1 164 - -
Sto9g1933 185 SUPERFAMILY DNA-binding domain 31 90 IPR016177 GO:0003677
Sto9g1933 185 Pfam AP2 domain 30 80 IPR001471 GO:0003700|GO:0006355
Sto9g1933 185 SMART rav1_2 31 94 IPR001471 GO:0003700|GO:0006355
Sto9g1933 185 PRINTS Ethylene responsive element binding protein signature 32 43 IPR001471 GO:0003700|GO:0006355
Sto9g1933 185 PRINTS Ethylene responsive element binding protein signature 54 70 IPR001471 GO:0003700|GO:0006355
Sto9g1933 185 MobiDBLite consensus disorder prediction 123 150 - -
Sto9g1933 185 CDD AP2 30 90 IPR001471 GO:0003700|GO:0006355
Sto9g1933 185 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 164 - -
Sto9g1933 185 MobiDBLite consensus disorder prediction 123 172 - -
Sto9g1933 185 Gene3D AP2/ERF domain 31 90 IPR036955 GO:0003700|GO:0006355
Sto9g1933 185 ProSiteProfiles AP2/ERF domain profile. 31 88 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1933 Sto-Chr9 23554180 23555806 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1933 1 163 AP2-EREBP Transcription Factor Family AT3G20310 57.754 4.08e-48 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sto9g1933 AP2 9.2e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1933 K09286 - pvy:116145234 169.474