Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1919 ATGCATGATTTGCTTCAACAGATGGGAAGGAATATTGTTACACAAGAATCTTCAGATGATCCTAGCTGTCAAAGTAGGTTGTGGTCTCAGGAAGAGATTGATGCTATGTTGAAAGGAAATATAGGAAGCAAAAAAGTTCAAAGTATACATTTGAATTTACAAGAGCAGTATAAAACAAACTGGGACCCGGATTGCTTCTCAACTTTGGGGAATCTCATATTACTCTACTTAAGCAATGTGCATCTTTCTTGTAGTCTCAATACTCTTCCTAGTGCATTGAAAGTTCTGATATGGGAAAGATATTCTTTGCAAGCTTTGCCACACAATATTAGCCAATTATATAAACTTGTGGACCTTAGGTTGCGTTACAGCAAAATCAAATGTCTTTGGAATGGAACACCGATTTTAGATAAATTGAAGTTCATTGATTTGAGTTACTCAGAAGATCTGATTGAAATGCCAGATCTCAGAGGAGTTCAGAATCTTGAAAGTTTGCTTCTGGAAGGTTGCATAAGCCTAGTTAGAGTCCACGAATCTCTTGGACAGCTCAGGAGGCTTGTTAAGTTGAATATGAAAGATTGCAGAAATCTTGTCAGCCTTCCAACTAAGTTGGAAATGAATTCCCTAGAGGAGTTGGTTCTTTCTGGATGCTTGAAACTTGAAGAGCTTCCTGAGTTTGGGAAAGATATGAAAAGCCTTTCAATTTGTGACTTGAGTGAAACTAGTGTGAAAGAAGTTCCTCCATCTATCATTCATTTATCAAACATTAAAGAGCTATCTCTTCGTGGAAGCAAAGGGCTAGTTTCCAACTCATCATGGGGCTTGTCACGGCTATTTTGGTTCATGAGGCGTCCAATTCATAAGGGATTGAGGTTGCCCTCTCTCTCAGGTCTCTCTTCATTGAAGAAATTGGATTTAAGTGACTGCAATTTATATGATGGATCAATCCCTGATGATTTGAATGGCTTATCATCATTGAAGACTTTAGATCTAAGTGGAAACAATTTTGCTAGCCTACCTGCTGGCTGCATCTCTAATCTTTCAAATCTTGAATATTTCTACTTGATTAATTGCCCCAGGCTTCAGTCAATGCCCCATCTTCCACCAAATTTACTTAAAGTGAATGCAAGTCGCTGCCCTTCCATGGAACCTTTATTAGATCTACAAAATCTCTTTGCATCACTTGTGGCTAAGCATCGCCACCttctgttatatgaggacattGTGCTGCAGATTACAGGGGATGAAATCCCATCATGGTTTGAACAACGAGAATGTTACATTAATCACTTTCGTTCAGCTGTTTTAATAACAATGAACATCCCTTATGTTCGTGATACGAGAGAGTGGTCGGGAATTGCTGTTTGCCTTTTGTTGAAAGACATGATAAGTCCATCTGGAACGTCTCACCGAATTTACTGGTCTTTCAAAGATTCCGAAGATGCTATACATTATGATGTTAGATTTGGATGTTGGGTTAAGAATTCATCTGTTGAGTCTCAACTTTATACGGCATTCTTCCCCTTTAATAGTTTAAACTGTTGGCGACATCTTAGTGGTGGTCGCAGCCATCTTAAATTACTAATTGCTACTTTTTTACCGGGTCGATCTACTAGATGGGAATCAGCGAAAGGAAACATGAAAATTATGGATTGTGGGTGGCGTCTGATATGTCACGTTTGGTACATGTTTTATAGGCAGGAAGATTCTCAAGTTTACTGCATCCAGAAAGAATCAGTTCCTCTAGAGAATCTGTTTCCAATTTCCTCAGAAAGGCTTATGCATCCATCAAGAAACAAGTTTTCAAGGTCTGAAACTCCACTGAAATCTGGCGTTTCAATTAGAGCTTCAGAGCAAGACAGGTTGATGAACTTGAGCTCCACAAGTTCATACAATTGGTCAATATTTGGTGGCAGAGCTTTTAAAGGGCATTTCTCCCATATAAGAACTTTCAATGCACTGGGAAGAGAGCTGAGACGACACGAAAGATGCACATTTTTCAGGTTTCAAAACTATGCTTTGAATTCTTTTGGATCCCTGCTAAACATGATGAGTTATAATCCTCAATAA 2070 0.3845 MHDLLQQMGRNIVTQESSDDPSCQSRLWSQEEIDAMLKGNIGSKKVQSIHLNLQEQYKTNWDPDCFSTLGNLILLYLSNVHLSCSLNTLPSALKVLIWERYSLQALPHNISQLYKLVDLRLRYSKIKCLWNGTPILDKLKFIDLSYSEDLIEMPDLRGVQNLESLLLEGCISLVRVHESLGQLRRLVKLNMKDCRNLVSLPTKLEMNSLEELVLSGCLKLEELPEFGKDMKSLSICDLSETSVKEVPPSIIHLSNIKELSLRGSKGLVSNSSWGLSRLFWFMRRPIHKGLRLPSLSGLSSLKKLDLSDCNLYDGSIPDDLNGLSSLKTLDLSGNNFASLPAGCISNLSNLEYFYLINCPRLQSMPHLPPNLLKVNASRCPSMEPLLDLQNLFASLVAKHRHLLLYEDIVLQITGDEIPSWFEQRECYINHFRSAVLITMNIPYVRDTREWSGIAVCLLLKDMISPSGTSHRIYWSFKDSEDAIHYDVRFGCWVKNSSVESQLYTAFFPFNSLNCWRHLSGGRSHLKLLIATFLPGRSTRWESAKGNMKIMDCGWRLICHVWYMFYRQEDSQVYCIQKESVPLENLFPISSERLMHPSRNKFSRSETPLKSGVSIRASEQDRLMNLSSTSSYNWSIFGGRAFKGHFSHIRTFNALGRELRRHERCTFFRFQNYALNSFGSLLNMMSYNPQ 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1919 689 SMART LRR_typ_2 323 346 IPR003591 -
Sto9g1919 689 SMART LRR_typ_2 298 322 IPR003591 -
Sto9g1919 689 SUPERFAMILY L domain-like 51 397 - -
Sto9g1919 689 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 401 IPR044974 GO:0006952
Sto9g1919 689 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 1 401 - -
Sto9g1919 689 Gene3D Ribonuclease Inhibitor 286 426 IPR032675 -
Sto9g1919 689 ProSiteProfiles Leucine-rich repeat profile. 325 346 IPR001611 GO:0005515
Sto9g1919 689 Gene3D Ribonuclease Inhibitor 28 279 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1919 Sto-Chr9 23443508 23449927 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1919 1 360 WRKY Transcription Factor Family AT4G12020 33.422 1.61e-36 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1919 - - vra:106763277 333.954