Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1916 TTGGAAGATGGAGCAGAACAAGAGAGTTGGAAAGAAGATAAGAAAACAAAGGCCAAACTCATGGAGCttgatttggggttttgtgaGGAGCTTGATTTGCCACTTCCACCGCCGGTACCTCCGCCATCGCCGCCGGCAGAAGACATCAAACCAAAGGGAAGGGGGATGAGACCAGAAATCATAGCAGAGAGAGAGCATATTCAGAGGAGGGCAAAAATGTCTTCTTGCCCCAATTCCACAAACAATCCTCCAATTCCatTTATGGTTGAATATTTCTGGCAAAGAAGCAAAGAATATTTGTATATGCATGATTTGCTTCAGGAAATGGGAAGAAATATTGTTACACAAGAATGTTCAGATGATACTAGCCGTCAAAGCAGAATGTGGTCTCAAGAACAGATTGATGTAGTCTTGAAAGGAAATAAAGGAACAAGAAAAGTTCAAGGTATATATTTGAATTCACAATGGCAATATAAAACAGAATGGCACCGAGATTGCTTCTCAAGTTTGCAGAATGTTATATTACTCTGCTTAAGCAATGCGCATATTTCTCATAGACTCAATTCTCTTCCTACTGCACTGAAAGTTTTTATATGGGAACGATGTCCTTTGGAAGCTCTGCCACACAATATTGACCAATTATATGAACTTGTGGACCTTAGGCTGCGTCATAGCAGAATCAAACTTCTTTGGAATGGTGCACCGTATTTAGATAAATTGAAGTTCATTGATTTGAGTCACTCTGAAGATTTAATTGAAATGCCGAATGTTGAAAGAATTCAAAATCTTGAGAGTTTGCTTTTGGAAGGTTGCATAAGCCTAGTTAGAGTTCACGAATCTCTTGGACAGCTCAAGAAGCTTGTTAAGTTGAATATGAAAGATTGCAAAAATCTTGTCTTCCTTCCTACTAAGTTGGAAATGAATTCCCTAGAGGAGCTGATTCTTTCTGGATGCTCAAAACTTGAAAAGCTTCCTGAGTTTGGGGAAGATATGAAAAGCCTCTCTATTTGTGACTTGAGTGAaactaaagtgaaagaaatTCCTTCATCCATAGTTAAGTTAACAAATATTAAAGAGCTATCTCTCCGTGGAAGCAAAGGGCTAGTTTCCAACTCATGGGGCTTGTCTCGGCTATTTTGGTTCATGAGGCGTCCAATTTCTATGGGACTGAGGTTACCCTCTTTCTCAGGTCTCTCTTCATTGAAGAAACTGGATTTAAGTGACTGTAATCTATGGGATGGATCAATCCCTGATGATTTGAGTGGCTTATCATCATTGATGGATTTGGATCTTAGTGGAAATAATTTTTCTAGCCTACCTGCTGGCTGCATTTCCAATCTAACAAATCTTGAATATTTCTACTTGAGTAATTGCCTCAGGCTTCAGTCAATGCCTCATCTTCCACCAAATTTACTTAAAGTGGATGCAACTAACTGTCCTTCCATGGAAACTTCATTAGATCTGCAAAATCTCTTTGCATCACTTGTCGCTAAGCATCGCCACCttctgttatatgaggacattGTGCTGCAGATTCCAGGGGATGAAATCCCATCATGGTTTGAACAACGAGAATGTTATATTAATCACTTTCGTTCAGCTGTTTTAATAACAATGAACATCCCTTATGTTCGTGATACGAGAGAGTGGTCGGGAATTGCTGTTTGCCTTTTGTTGAAAAACATGATAAGTCCACCTGGAAGGTCTCACCAAATTTTCTGGTCTTTCAAAGATTCCGAAGATGATATACATAATGATTGTAGATTTGGATGTTGGGTTAAGAATTCATCTGTTGAGTCTAAACTTTATACGGCATTTTTCCCCTTTAATAGTTTAAACTGTTGGCGACATCTTAGTGGTGGTCGCAGCCATCTTAAATTACTAATTGCTACTTTTTTACCGGGTCGATCTACTAGATGGGAATCAGCGAAAGGAAACATGAAAATTATGGATTGTGGGTGGCGTCTGATATGTAAGAAAGATTTTGAAGCGTATGGCGCAAGTAATGCTAGCAGTAGCCTTCAGATTACAGAGCTTCACAATGACTAG 2049 0.3831 LEDGAEQESWKEDKKTKAKLMELDLGFCEELDLPLPPPVPPPSPPAEDIKPKGRGMRPEIIAEREHIQRRAKMSSCPNSTNNPPIPFMVEYFWQRSKEYLYMHDLLQEMGRNIVTQECSDDTSRQSRMWSQEQIDVVLKGNKGTRKVQGIYLNSQWQYKTEWHRDCFSSLQNVILLCLSNAHISHRLNSLPTALKVFIWERCPLEALPHNIDQLYELVDLRLRHSRIKLLWNGAPYLDKLKFIDLSHSEDLIEMPNVERIQNLESLLLEGCISLVRVHESLGQLKKLVKLNMKDCKNLVFLPTKLEMNSLEELILSGCSKLEKLPEFGEDMKSLSICDLSETKVKEIPSSIVKLTNIKELSLRGSKGLVSNSWGLSRLFWFMRRPISMGLRLPSFSGLSSLKKLDLSDCNLWDGSIPDDLSGLSSLMDLDLSGNNFSSLPAGCISNLTNLEYFYLSNCLRLQSMPHLPPNLLKVDATNCPSMETSLDLQNLFASLVAKHRHLLLYEDIVLQIPGDEIPSWFEQRECYINHFRSAVLITMNIPYVRDTREWSGIAVCLLLKNMISPPGRSHQIFWSFKDSEDDIHNDCRFGCWVKNSSVESKLYTAFFPFNSLNCWRHLSGGRSHLKLLIATFLPGRSTRWESAKGNMKIMDCGWRLICKKDFEAYGASNASSSLQITELHND 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1916 682 Pfam Leucine rich repeat 421 458 IPR001611 GO:0005515
Sto9g1916 682 Gene3D Ribonuclease Inhibitor 145 328 IPR032675 -
Sto9g1916 682 Gene3D Ribonuclease Inhibitor 329 497 IPR032675 -
Sto9g1916 682 SUPERFAMILY L domain-like 102 503 - -
Sto9g1916 682 SMART LRR_typ_2 423 446 IPR003591 -
Sto9g1916 682 SMART LRR_typ_2 214 237 IPR003591 -
Sto9g1916 682 SMART LRR_typ_2 398 422 IPR003591 -
Sto9g1916 682 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 97 491 - -
Sto9g1916 682 MobiDBLite consensus disorder prediction 33 48 - -
Sto9g1916 682 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 97 491 IPR044974 GO:0006952
Sto9g1916 682 MobiDBLite consensus disorder prediction 31 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1916 Sto-Chr9 23405746 23410991 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1916 102 451 WRKY Transcription Factor Family AT4G12020 34.605 1.95e-34 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1916 - - vra:106763277 323.939