Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1915 ATGTGCAATCACTCCATTCTTAATACAATATTCCTGCTTCTGATCGGAAAGACTACTATTATCATCACCACCGGGACCTTCGAAACTCCAATAAAATGTGTGGCCTATGTGAAGATGTCTTCGGATCCTGGGTTTTACCTTAAGGCATATAGCAACTCCCGACCATTCAATTTCATCAGAGGCATAAGGGTCAAGCCGTTCAAGATTTACAAGATTGATGCTATGTTGAAAGGAAATATAGGAAGCAAAAAAGTTCAAAGTATACATTTGAATTTACAAGAGCAGTATAGAACAAACTGGGACCCGGATTGCTTCTCAACTTTGGGGAATCTTATATTACTCTACTTAAGCAATGTGCATCTTTCTTGTAGTCTCAGTACTCTTCCTAGTGCAGTGAAAGTTCTGATATGGGAAAGATATTCTTTGCAAGCTTTGCCACACAATATTAGCCAATTATATAAACTTGTGGACCTTAGGTTGCGTTACAGCAAAATCAAATGCCTTTGGAATGGAACACCGGTTTTAGGTAAACTGAAGTTCATTGATTTGAGTTACTCAGAAGATCTGATTGAAATGCCAGATCTCAGAGGAGTTCAGAATCTTGAAAGTTTGCTTCTGGAAGGTTGCATAAGCCTAGTTAGAGTCCACGAATCTCTTGGACAGCTCAGGAGGCTTGTTAAGTTGAACATGAAAGATTGCAGAAATCTTAAACTTGAAGAGCTTCCTGAGTTTGGGGAAGATATGAAAAGCCTCTCTATTTGTGACTTGAGTGAAACTAGTGTGAAAGAAGTTCCTCCATCTATCATTCATTTATCAAACATTAAAGAGCTATCTCTTCGTGGAAGCAAAGGGCTAGCCTCCAATTACTCAAGGGGCTTGTCTCAGCTACTTTGGTTCATGAGGCATCCAATTTCTATGGGACTAAGTTTGCCCTCTTTCTCAGGTCTCTCCTCATTGAAGAAGCTGGATTTAAGTGATTGTAATCTATGTGATGGATCAATCCCCGATGATTTGAGTGGCTTATCATCATTGATGGATTTGGATCTTAGTGGAAATAATTTTGCTAGCCTACCTGCTGGCTGCATTTCCAATCTAACAAATCTTGAATATTTCTACTTGAGTAATTGCCTCAGGCTTCAGTCAATGCCTCATCTTCCACCAAATTTGCTTAAAGTGGATGCAACTCACTATCCTTCCATGGAAACTTCATTAGATCTGCAAAATCTCTTTGCATCACTTGTTGCTAAGGTCTCTCTCTCCATCCATGCTTCTCTATCTTAA 1281 0.3934 MCNHSILNTIFLLLIGKTTIIITTGTFETPIKCVAYVKMSSDPGFYLKAYSNSRPFNFIRGIRVKPFKIYKIDAMLKGNIGSKKVQSIHLNLQEQYRTNWDPDCFSTLGNLILLYLSNVHLSCSLSTLPSAVKVLIWERYSLQALPHNISQLYKLVDLRLRYSKIKCLWNGTPVLGKLKFIDLSYSEDLIEMPDLRGVQNLESLLLEGCISLVRVHESLGQLRRLVKLNMKDCRNLKLEELPEFGEDMKSLSICDLSETSVKEVPPSIIHLSNIKELSLRGSKGLASNYSRGLSQLLWFMRHPISMGLSLPSFSGLSSLKKLDLSDCNLCDGSIPDDLSGLSSLMDLDLSGNNFASLPAGCISNLTNLEYFYLSNCLRLQSMPHLPPNLLKVDATHYPSMETSLDLQNLFASLVAKVSLSIHASLS 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1915 426 Gene3D Ribonuclease Inhibitor 240 416 IPR032675 -
Sto9g1915 426 SUPERFAMILY L domain-like 89 400 - -
Sto9g1915 426 Gene3D Ribonuclease Inhibitor 83 239 IPR032675 -
Sto9g1915 426 Pfam Leucine Rich Repeat 154 172 IPR011713 -
Sto9g1915 426 SMART LRR_typ_2 152 175 IPR003591 -
Sto9g1915 426 SMART LRR_typ_2 341 364 IPR003591 -
Sto9g1915 426 SMART LRR_typ_2 316 340 IPR003591 -
Sto9g1915 426 Pfam Leucine rich repeat 339 376 IPR001611 GO:0005515
Sto9g1915 426 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 74 406 IPR044974 GO:0006952
Sto9g1915 426 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 74 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1915 Sto-Chr9 23399100 23401209 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1915 118 389 WRKY Transcription Factor Family AT5G45050 33.213 5.89e-22 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1915 - - gmx:100799850 215.698