Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1901 ATGATGATGGAAGCGACTTGCAGTGATTCTATGGGAAACTCGAACTCCGATCGGCATTCTTCTCCCCTCATTTCCTTCAACGGGAAACGGCTCGTCGTCGATGAAATGGATTTCTTCGCCGATGAGAATTCCAAGAAGGATAGTATTAATAATAACACTAGTcatcaacaaaataataatattgttgatGATGAAGATCATGATCACATGCTCCACAGTATAGAGCTTCAAGTAGAtTTTGAAGCATTGGTAGCTGAATTGGAGCAGATGAATGCTGAAAATAGACGTTTGAAGGAGCAAATTGATCAAGCTAACAATAACTATAATGCCTTACATATGCAACTTCTCAAGCTCATGCAGAAGAAGCAACATGATGATGATCATCATgggATTAAGGAAACCCTAGATGACCAGAAGAGAAGAAATAATGGAAGCAAAAATATGGTTGCAATGCAATTCATAGAAATGGGTGTGAATGCTGACAAAAAccacaataattttcttaggaAAGATCATCATCAAAGTGGAGAAGCAAGATTATTGGGAGAAAGCAAAAGCAGCAATAATATGGTTGAGTTGaaagatcatcatcatcatggtaattataatcatcatcatcataattacAAGAAGATGGTAGATGGAAACAAAGGAATAAGCAGATCATCAAGGGATCATCATCATAACATTATTACTGAGCAAGATCAGAGAGATCATATGAATGATaatgatcaaaataataataataataataataacaacaacaacagcaacaacaacaataatgacCATTCGGAGGAAGCAATAGTCCCAGGGTGGCTGTCGAATAGAGTGTCAAAACTAAGCCCTTCGAAGAGAGATAACGTTAATGTGGATCATCAAACATCGAAGACCTTATCAATGATCAAGAAAGCTCGTGTTTCAGTTCGTGCACGATCAGAATCCTCAATGATTTCTGATGGATGCCAATGGAGAAAGTATGGGCAGAAGATGGCCAAAGGAAATCCATGTCCAAGAGCTTATTATCGTTGCACTATGGGGGCTGGTTGTCCCGTCCgaaaacaaGTACAAAGATGTGCTGAAGATAGGAGCATACTCATCACAACATACGAAGGGCAGCACAACCACCCACTCCCTCCCACCGCGAAGACGATGGCTTCCACCACATCGGCCGCCGCCTCCATGCTCCTCTCCGGCTCGATGCCGAGCAGCGACCCCGGCGCCGGCATAATGAACCCCAACATTCTAGAAAGCGCCGTGCATTGCACACAAAACTTCGCTACCCTCTCAGCCTCAGCTCCATTTCCCACCATCACATTGGACCTCACAGCCCaaaccaataataataataacaataacaacaataataattcgTCGTCACAACCGCCACAAATGAGCAATGTGCTACCTCCAAGCCTTTTTGGACAATCACTTGTGAGTGACAAAACCAAGTTTTCCGGCCTACATATCAATGGGACCCACgcgaataataataatagtagtagtGAAGGAACGGCGTCGTTTGCCGACACGGTGAATGCTGCAACCGCTGCTATTACTGCGGATCCTAATTTTACGGCGGCTCTCGTCGCCGCCGTGACGACGATTATCGGGAGTTCCTATTCCAACAACGGCGGCGGCACCAATAACGCGTGA 1656 0.3943 MMMEATCSDSMGNSNSDRHSSPLISFNGKRLVVDEMDFFADENSKKDSINNNTSHQQNNNIVDDEDHDHMLHSIELQVDFEALVAELEQMNAENRRLKEQIDQANNNYNALHMQLLKLMQKKQHDDDHHGIKETLDDQKRRNNGSKNMVAMQFIEMGVNADKNHNNFLRKDHHQSGEARLLGESKSSNNMVELKDHHHHGNYNHHHHNYKKMVDGNKGISRSSRDHHHNIITEQDQRDHMNDNDQNNNNNNNNNNNSNNNNNDHSEEAIVPGWLSNRVSKLSPSKRDNVNVDHQTSKTLSMIKKARVSVRARSESSMISDGCQWRKYGQKMAKGNPCPRAYYRCTMGAGCPVRKQVQRCAEDRSILITTYEGQHNHPLPPTAKTMASTTSAAASMLLSGSMPSSDPGAGIMNPNILESAVHCTQNFATLSASAPFPTITLDLTAQTNNNNNNNNNNNSSSQPPQMSNVLPPSLFGQSLVSDKTKFSGLHINGTHANNNNSSSEGTASFADTVNAATAAITADPNFTAALVAAVTTIIGSSYSNNGGGTNNA 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1901 551 ProSiteProfiles WRKY domain profile. 313 379 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g1901 551 Coils Coil 73 121 - -
Sto9g1901 551 Gene3D WRKY domain 303 380 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto9g1901 551 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 228 544 IPR044810 GO:0003700
Sto9g1901 551 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 13 71 IPR044810 GO:0003700
Sto9g1901 551 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 78 208 IPR044810 GO:0003700
Sto9g1901 551 Pfam WRKY DNA -binding domain 320 377 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g1901 551 MobiDBLite consensus disorder prediction 7 21 - -
Sto9g1901 551 MobiDBLite consensus disorder prediction 443 473 - -
Sto9g1901 551 PANTHER WRKY TRANSCRIPTION FACTOR 6-LIKE 78 208 - -
Sto9g1901 551 PANTHER WRKY TRANSCRIPTION FACTOR 6-LIKE 228 544 - -
Sto9g1901 551 PANTHER WRKY TRANSCRIPTION FACTOR 6-LIKE 13 71 - -
Sto9g1901 551 MobiDBLite consensus disorder prediction 1 21 - -
Sto9g1901 551 MobiDBLite consensus disorder prediction 243 266 - -
Sto9g1901 551 SUPERFAMILY WRKY DNA-binding domain 311 379 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto9g1901 551 SMART WRKY_cls 318 378 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g1901 551 MobiDBLite consensus disorder prediction 207 242 - -
Sto9g1901 551 MobiDBLite consensus disorder prediction 196 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1901 Sto-Chr9 23293450 23297134 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1901 83 537 WRKY Transcription Factor Family AT4G04450 42.208 2.40e-92 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto9g1901 WRKY 2.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1901 - - adu:107496306 362.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g1901 9 23293450 23297134 Sto10g0483 10 3920785 3923429 ECH
Sto7g0697 7 5120539 5129717 Sto9g1901 9 23293450 23297134 ECH
Sto12g0490 12 3215827 3217722 Sto9g1901 9 23293450 23297134 ECH
Sto9g1901 9 23293450 23297134 Sto9g1901 9 23293450 23297134 ECH