Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1900 ATGGGTGAAGCTAACGCTGGACGAACTGAGCCTCTCTTGCTTCCGTGGGAGATGAAGAGAAAGATTCAAGACGAGATGGGCGGCTTCGAGATCAAGTTGCTTTTGGAGAAGCAATTGTTTCCGACTGATTTGTGCTCCAAGCATAACCGCTTCTCGATCCCGATCAACAAGATTTCGAAGGAGTTCCTGagggaagaagagaagaaggttCTGGAAACACGAAGCGGCGATGGTAATAAATTAGGCGGTATTAGAGTGAAGATCGTGGATCCTTGTCTCAGAGAGTATGATTCGTTGCTGGAGAAGTGGGCCATCACGAGCCCAATTTACAATCTCACTCACCAATGGATTTCTGTTGTTCAAGACAACCAATTCCAATGCGACGACGCCGTACAGCTTTGGTCTTTCAGAGTTCCTCATGATGAACTCTGCTTTGCATTAGTAGTTCCATTACGATCTTCTGATCCATCGGATTGTATATAA 483 0.4389 MGEANAGRTEPLLLPWEMKRKIQDEMGGFEIKLLLEKQLFPTDLCSKHNRFSIPINKISKEFLREEEKKVLETRSGDGNKLGGIRVKIVDPCLREYDSLLEKWAITSPIYNLTHQWISVVQDNQFQCDDAVQLWSFRVPHDELCFALVVPLRSSDPSDCI 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1900 160 Gene3D - 27 155 IPR015300 -
Sto9g1900 160 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 7 157 IPR005508 GO:0003677
Sto9g1900 160 SUPERFAMILY DNA-binding pseudobarrel domain 34 138 IPR015300 -
Sto9g1900 160 Pfam B3 domain-containing protein At2g31720-like 22 121 IPR005508 GO:0003677
Sto9g1900 160 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF313)-RELATED 7 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1900 Sto-Chr9 23291235 23291849 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1900 20 158 B3 DNA Binding Superfamily AT1G05930 32.026 9.69e-15 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1900 - - pvu:PHAVU_008G266500g 117.472