Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1891 ATGGCAAACGCTAATGATTATGATGATAACAAAGCGGAGAATGATGATTCTGGGTTGGTTTTGGCAATCGGCAGTGGTGAAGGAGGTGGCGAGGGTGTTGGCGTAGCTACGGTGGTGGCGGCGGAGGAGGTGGCCTTCAAGAAGGGTCCATGGACTGCGGCTGAGGATGCGAAGAATACGGGGTTGTCTCGATGTGGTAAGAGCTGTAGATTGAGATGGACCAACCATTTGCGTCCCAATTTGAAGAAGGGTGCTTTCTCCCCTGAGGAAGAGAAGCTTATTCTTGAGCTCCATGCCCAGTTCGGCAACAAATGGGCTCGAATGGCCACTCTTCTACCTGGGCGAACAGACAATGAAATCAAGAACTACTGGAACACTAGGGTGAAGCGTAGGCAACGCCAAGGCCTACCTCTATATTCCAGTGAACTTGATTCGGCAACAATGCCAACTATGTGCACtacacctgccaccaccactacTACACAATCGATCACTGCATTGGTTTCTTCAAATTTTGACTTTTATCATCAAAACCACCTTCCTCTATCATCACTCCACTCTGGACCTGCCTATTCTAATTGCACCCCTTTTGCAGATCTTAATTCTCtgccttccccttcttctctttcctttccctttcacCAATCTTCATTACACATCGCCCCACTTCGTCCCAAACGTTTCCGGACCTCCACAACACTATTGGATCAAACTTTACCTACCCCATTGGCTGATCATGATGGATTCGACTTTTCTGCTCATTTGAGTTCTAGTTTGTCTCAAAATTTTGGGACTCCACTAGAATCATCATCTTCAGTTCTTGGGGTTCTACCCCCCACTATTTTCTCAACGAAAATGGAGCTCCCTTCAATCCAATTTTCCCAATCCATAGAGCCAGATAATAAGCTTGTTATGGAAATGGAAGACCCTGCTTTACATCCCAGTAATGACATGCTGGGGGATCTTCTACTAGAAGCTCAAGCATTGGTATCTGGACAGAATTCGAAGAAACGAAATTACTCGAGTTTCAGTGAAGGAAACGGTGTCTTTGATAGATGCCAAGGCTTGGATGATTTGCCTCTTAGCTCTGTTTACTGTTCTTCTTCTGGATTGAAATCAACGCTAGAACCACAAGACCTAAGCAAATCCACGAATGACTTCTCGACACTACTTTATGGAATGCCTTCCACAATTCAAGTTCCAGATTGGCACATTGACATGCCTGCACAAGTGCCTGATGTCCAATCTTCTGGCGCCATCATGGaagatgataattttgaacttGACTTCAAGGCCATTGCTTCATTGCTTCCTATTACCACctcaacaaaccctaatgagAACCCTGGCCTCTACTCTTGGGACACCTTACCTGGACTCTGCTGA 1386 0.4293 MANANDYDDNKAENDDSGLVLAIGSGEGGGEGVGVATVVAAEEVAFKKGPWTAAEDAKNTGLSRCGKSCRLRWTNHLRPNLKKGAFSPEEEKLILELHAQFGNKWARMATLLPGRTDNEIKNYWNTRVKRRQRQGLPLYSSELDSATMPTMCTTPATTTTTQSITALVSSNFDFYHQNHLPLSSLHSGPAYSNCTPFADLNSLPSPSSLSFPFHQSSLHIAPLRPKRFRTSTTLLDQTLPTPLADHDGFDFSAHLSSSLSQNFGTPLESSSSVLGVLPPTIFSTKMELPSIQFSQSIEPDNKLVMEMEDPALHPSNDMLGDLLLEAQALVSGQNSKKRNYSSFSEGNGVFDRCQGLDDLPLSSVYCSSSGLKSTLEPQDLSKSTNDFSTLLYGMPSTIQVPDWHIDMPAQVPDVQSSGAIMEDDNFELDFKAIASLLPITTSTNPNENPGLYSWDTLPGLC 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1891 461 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 27 430 - -
Sto9g1891 461 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 27 430 - -
Sto9g1891 461 Gene3D - 58 82 - -
Sto9g1891 461 ProSiteProfiles Myb-like domain profile. 78 128 IPR001005 -
Sto9g1891 461 CDD SANT 85 126 IPR001005 -
Sto9g1891 461 Gene3D - 85 131 - -
Sto9g1891 461 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 78 132 IPR017930 -
Sto9g1891 461 SUPERFAMILY Homeodomain-like 63 132 IPR009057 -
Sto9g1891 461 SMART sant 47 79 IPR001005 -
Sto9g1891 461 SMART sant 82 130 IPR001005 -
Sto9g1891 461 Pfam Myb-like DNA-binding domain 83 126 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1891 Sto-Chr9 23215822 23218139 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1891 19 142 MYB Transcription Factor Family AT4G26930 57.746 2.84e-49 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto9g1891 Myb_DNA-binding 3.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1891 - K09422 lja:Lj6g3v0869180.1 365.925
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g1891 9 23215822 23218139 Sto9g1891 9 23215822 23218139 ECH