Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1887 ATGGTTGATTTGGAAGTTCAGCTCCCCACTCCCTTCGATCCATTCGCAGAAGCCAAAGAATCTGATGCTCCGGGAGGCAAAGGGTATGTACATATCAGAATTCAACAGAGGAATGGGAAGAAGAGCCTAACCACCGTTCAGGGCCTGAAGAAGGAATACAGCTACGAGAAGATCCTCAAAGACCTCAAGAGGGAATTCTGTTGCAACGGCAACGTCGTGCACGACAAGGAGCTCGGCAAGATCATCCAACTCCAAGGTGATCAGCGCAAGAACGTCTCTCAGAAACTCGTTCAGGCTGGTCTCGTCAGGAAGGACCAGATCAAGATTCATGGTTTTTGA 339 0.4926 MVDLEVQLPTPFDPFAEAKESDAPGGKGYVHIRIQQRNGKKSLTTVQGLKKEYSYEKILKDLKREFCCNGNVVHDKELGKIIQLQGDQRKNVSQKLVQAGLVRKDQIKIHGF 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1887 112 CDD eIF1_SUI1 28 111 IPR005874 GO:0003743
Sto9g1887 112 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 112 - -
Sto9g1887 112 PIRSF Transl_init_SUI1_Euk 1 112 IPR005874 GO:0003743
Sto9g1887 112 PANTHER PROTEIN TRANSLATION FACTOR SUI1 HOMOLOG 1 112 - -
Sto9g1887 112 ProSiteProfiles Translation initiation factor SUI1 family profile. 30 100 IPR001950 GO:0003743|GO:0006413
Sto9g1887 112 Gene3D - 2 112 - -
Sto9g1887 112 SUPERFAMILY eIF1-like 4 112 IPR036877 GO:0003743|GO:0006413
Sto9g1887 112 Pfam Translation initiation factor SUI1 28 100 IPR001950 GO:0003743|GO:0006413
Sto9g1887 112 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 6 112 IPR005874 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1887 Sto-Chr9 23181650 23181988 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1887 1 112 Eukaryotic Initiation Factors Gene Family AT5G54940 80.357 1.10e-65 192
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g1887 9 23181650 23181988 Sto9g1887 9 23181650 23181988 ECH