Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1886 ATGGGTCTCTGTCTCAGTAAAGGCAAAGAATCAGAGCGAGACTACAATAATAATGTCCACAGAGTGAACAATCAGAAGATCCACGAACCCTACGATGTGAATCAATCGAAGCCCAATTTACCTGAGAAGCCTCCGGTTCGCGCTTCGCCATACCCTAATAATAAGCATCATCTTCGCAGTACGATTCTCGGGAAGCCGTTCGAGGACGTGAGGCATTTCTATACGATGGGGAAGGAGCTAGGGAGGGGTCAATTCGGGGTGACCTATCTGTGTACGGAGAATTCCACTGGCAGACCCTACGCTTGCAAGTCGATTTCCAAGAGGAAGCTTGTGAGTAAATCGGATAAGGAGGATATAAAGAGGGAGGTTCAGATTATGCAGCATTTGAGTGGGCAGCCTAATATTGTGGAGTTTAAAGGAGCTTATGAGGATTATCTTTCCGTTCACCTTGTGATGGAGCTGTGTGCGGGTGGTGAGCTCTTTGATCGGATTATTGCGAAGGGGCATTATAGTGAGAGAGCTGCTGCTTCCATATGCAGGCAAATTGTTAATGTTGTTCATATATGCCACTTTATGGGTGTGATGCATAGGGATCTTAAGCCTGAGAATTTCTTGCTGGCTAGTAAGGATGAAAATGCACTTCTCAAAGCCACCGATTTTGGTTTGTCAGTTTTTATTGAAGaagGAAAGGTTTATCGGGATATAGTTGGGAGTGCTTATTATGTTGCTCCTGAAGTTCTACGTCGCAAATATGGAAAGGAGATTGATATATGGAGTGCAGGAGTTATATTGTATGTCTTACTCAGTGGTGTACCTCCTTTTTGGGCTGAGACGGAAAAGGGTATATTTGATGCGATATTAGAAGGTCATATTGATTTTGAAAGTCAACCATGGCCAACCATATCAAATAGTGCAAAGGACCTTGTTCGTAAGATGCTGACACCGGACCCAAGTAAACGCATTACTTCTGCTCAGGTTCTAGAGCACCCGTGGATTAGAGAAGATGGAAATGCTTCTGATAAACCAATAGACAGTGCAGTCCTTTCCAGGATGAAGCAATTCAGAGCAATGAATAAACTGAAGAAACTTGCCCTGAAGGTCATTGCGGAAAATCTTTCTGAAGAAGAAATCCAAGGTTTGAAAGCAATGTTTACAAATATGGACACCGACAAGAGTGGTACAATCACCTATGATGAACTAAAGGCGGGACTGCAAAGACTCGGCTCAAAGCTCACAGAGGCCGAAGTCAAGCAGCTTATGGAAGCTGCTGATGTAGATGGAAATGGCACCATTGACTACATAGAGTTCATCACTGCTACAATGCATAGACATAAATTAGAAAGAGATGAGAATCTTTACACGGCCTTCCAACATTTCGATACAGATAACAGTGGGTTCATTACAAGAGATGAACTTGAAACAGCCATGAAAGAATATGGCATGGGCGACGAAGCCACAATCAGAGACATCATATCAGAAGTTGACACTGATAATGACGGTAGAATCAATTATGAAGAATTCTGTACAATGATGAGGAGTGGAACCCAACAAGGCAAGTTATTCTGA 1566 0.4298 MGLCLSKGKESERDYNNNVHRVNNQKIHEPYDVNQSKPNLPEKPPVRASPYPNNKHHLRSTILGKPFEDVRHFYTMGKELGRGQFGVTYLCTENSTGRPYACKSISKRKLVSKSDKEDIKREVQIMQHLSGQPNIVEFKGAYEDYLSVHLVMELCAGGELFDRIIAKGHYSERAAASICRQIVNVVHICHFMGVMHRDLKPENFLLASKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRKYGKEIDIWSAGVILYVLLSGVPPFWAETEKGIFDAILEGHIDFESQPWPTISNSAKDLVRKMLTPDPSKRITSAQVLEHPWIREDGNASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENLSEEEIQGLKAMFTNMDTDKSGTITYDELKAGLQRLGSKLTEAEVKQLMEAADVDGNGTIDYIEFITATMHRHKLERDENLYTAFQHFDTDNSGFITRDELETAMKEYGMGDEATIRDIISEVDTDNDGRINYEEFCTMMRSGTQQGKLF 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1886 521 Pfam Protein kinase domain 74 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g1886 521 CDD STKc_CAMK 73 331 - -
Sto9g1886 521 ProSiteProfiles EF-hand calcium-binding domain profile. 375 410 IPR002048 GO:0005509
Sto9g1886 521 ProSiteProfiles EF-hand calcium-binding domain profile. 483 517 IPR002048 GO:0005509
Sto9g1886 521 MobiDBLite consensus disorder prediction 1 60 - -
Sto9g1886 521 Coils Coil 397 417 - -
Sto9g1886 521 PANTHER SERINE/THREONINE-PROTEIN KINASE 38 516 - -
Sto9g1886 521 SUPERFAMILY Protein kinase-like (PK-like) 73 339 IPR011009 -
Sto9g1886 521 ProSitePatterns EF-hand calcium-binding domain. 460 472 IPR018247 -
Sto9g1886 521 Gene3D Phosphorylase Kinase; domain 1 76 159 - -
Sto9g1886 521 SMART efh_1 451 479 IPR002048 GO:0005509
Sto9g1886 521 SMART efh_1 415 443 IPR002048 GO:0005509
Sto9g1886 521 SMART efh_1 486 514 IPR002048 GO:0005509
Sto9g1886 521 SMART efh_1 379 407 IPR002048 GO:0005509
Sto9g1886 521 ProSitePatterns EF-hand calcium-binding domain. 424 436 IPR018247 -
Sto9g1886 521 Gene3D - 341 516 - -
Sto9g1886 521 ProSitePatterns Protein kinases ATP-binding region signature. 80 103 IPR017441 GO:0005524
Sto9g1886 521 SUPERFAMILY EF-hand 371 511 IPR011992 -
Sto9g1886 521 ProSiteProfiles EF-hand calcium-binding domain profile. 411 446 IPR002048 GO:0005509
Sto9g1886 521 Gene3D Transferase(Phosphotransferase) domain 1 160 340 - -
Sto9g1886 521 ProSiteProfiles Protein kinase domain profile. 74 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g1886 521 CDD EFh 455 512 IPR002048 GO:0005509
Sto9g1886 521 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Sto9g1886 521 ProSiteProfiles EF-hand calcium-binding domain profile. 447 482 IPR002048 GO:0005509
Sto9g1886 521 ProSitePatterns EF-hand calcium-binding domain. 388 400 IPR018247 -
Sto9g1886 521 SMART serkin_6 74 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g1886 521 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 21-RELATED 38 516 - -
Sto9g1886 521 ProSitePatterns EF-hand calcium-binding domain. 495 507 IPR018247 -
Sto9g1886 521 Pfam EF-hand domain pair 450 512 IPR002048 GO:0005509
Sto9g1886 521 Pfam EF-hand domain pair 380 440 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1886 Sto-Chr9 23175271 23178741 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1886 60 521 EF-hand Containing Proteins AT3G20410 82.581 0.0 826
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Sto9g1886 Pkinase 4.5e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1886 K13412 - jre:108984131 865.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g1886 9 23175271 23178741 Sto9g1886 9 23175271 23178741 ECH