Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1870 CTGAATCGCGCTATATCTTCAGTTCTTCACCTTCTGCCTCGGATAATCTCGTCGTCTATTCCTGCCAAACAATTTCTCGAATCGGATCGTCCTCAGAGAGAGAAGCTCGGGATCGccatcgtcgtcgtcgtcgtcaagCTTGAGAAGGAAAATCTTGCCAAATTAGGTTATTGGGGTCAGATGACAGAGATCATTGTATCCATTGTTGCCAAATTCTCGGAATATCTGGTGCCTTTAACAATACGTCAAGGGCAGTATCTATTTTGTGGCCACAAAATCACGAAATGCcttgagaaagaaaagaaggcgtTGGCATCAACTCGTGATAGTGTGCAGAGAAGGATTGAAGATGCTAGTCATAGAGCAGAGAAAGTCACTGATGCTGTTTTGGGGTGGCTGAATGACGTGAAGGAACTCATAGAAGAGGTGGAGCTTCTGGAGCAAGAAATAGAAGCCCACAGCAGCAGTTGTTTCCGAGGGAAGTGTCCTAACAGGAAGAGATATAGTCTGTGcaaaaaaatggaaaagaaaacaaaggctATGATACAGCTGAACCAAAAAAGTGAATTTGAGCCATTTTCCCAGCCTGCCCCAATTCCAGATATAGAGTATTTCTCTTCTGAAAACTTTGAATATTTCCAGTCTACAATATTGGCTGCAGGTCAACTTTTGGAAGCCTTACAAGATGACAGTGGCTATATTATTGGTTTATATGGCATGGGAGGCTCTGGTAAAACAACACTGGTGAAAGAAGTGGGTAAGAAAGCCAAGGAATTAAGGCATTTTGATCGTGTTTTATTTGCCACTGTGTCCCATTCTCCAAATATCATGAAAATTCAAGATGAAATTGCTGAATTGTTAGATCTGATATTGGATGAAAGAAGTGAAGCTGGAAGAGCAAGGCGAATATCAATGAGATTACAAAGTGGAGAACGAATTCTCATAATTTTGGACGATGTTTGGGCTAAGCTCAACCTTGAGGAAATAGGGATTCCTGTTGATGGAAATCAAAAGGGTTGCAAGGTGCTTCTAACCACTCGGCGTCAAGATGTTTGTGATTTAATGGACTGTCCAAAGAGGATTCCTTTGAATCTCTTATCTGAAGGGGAAGCTTGGAGTTTGTTCCGAAAGCATGCAAGCATAGATGAAGATGCTTTATCATCTTCCAATCCATTAAATGATGTTCAGCGGAAGGTATGTAAGGAATGTAAAGGACTACCAATTGCAATTGTCGCTGTGGGAAGCTCCTTAAAAGGAAAATCTAGTGCAGTTGATGAGTGGAAGGTAGCCTTGCAGAGTTTAAGAGATTCAAAACCTATGGATGTGGATGAAGGCGTCAGAGATGCTTTCAATTGTCTTAAATTAAGTTACGAGTATTTGAAAAGCAAAGAAGCCAAGTTGCTCTTTTTAATATGTTCGATGTTTCCAGAAGATCATGAAATCCTTATTGATGACCTGTTCAAATATGGAGTGGCACTGGGCATTTGTGGGGAATGCTTTGATTTAGCAAGGAATCGGCTGAGAGTGTGTATAAATAAACTTGTTAATTCTTGTTTGTTGATGCCTTGTGAGACAAGTCAAGTTGACCTCGTCTTTCGCCGTAAAAATGATCGTGTGAAGATGCACGATATGGTTCGTGATGTAGCTTTGTGGATAGCATCAAAAGATCACCCCATTATGGTAAATCTTGCAAAAGATCTGAACGCATCCATAGACAACGGAGCTATAAAAGATTGTTTTGCACTGTCTTCATGGAACAACAATGGAATAGATAAGTTTCCTCATGGATTGGATGCTCCAAAGCTTCAGATTCTATtactaaatctttttggtcaTAGAACCCCCCTACGTTTAACAGGACCCTGTGAATTATTGGAGGCATCTTTTCAAGGTATGAAAACACTAAAGGTTGTGGCTTTGatcaataaatatatctatCAGAAAGTGGCAATATCATTTCCTCAATCCTTGCAGTTGTTGACTAATCTTCGAACACTGCGCTTAGTAGGATGGGATTTGGGTGATATCTCTTTTGTGGTAAGCCTAAAAAGACTCGAGATTCTTGATTTGCAAGAGAGTAAATTCAAACAACTACCCAATGGAATTGAAAACCTTAACAAGTTGAAGTTGCTGGATTTGTCACTATGTAGAATTGAAGAGTCTTGTTTGAAAATAATTAGAAGATGTTCGCAGCTAGAAGAGTTATATGCCTTTAACTATGGTGATAGCTCAAGCCTTGGAATTACGGGTCCCTACGAATGCTTTGAGGATGATATCACTTCCCCAAGTTTGCAAAGTTACAAATTATGTATAGGGCCGTTTATGAGCCATCCATCTAAGATGCATTCATTAACCACAAGACTTCTATACATAAATGGATTTAACCCCTCTGCCTCAGATGTTTTTGTTAAGTATCTTCTGCGAAGGGCACAGGATGTTCTTTTGTATAACCTTCATGGGGGATACAGAAATATCTTCCCAGACACAGTTCAAGCTGTTGGATGCATGAATGAGTTGACGAATCTCCAACTTAAAAATTGTTCAGAGATGGAATGCCTCATAGATGTCACTTCCAGTAGTGCTGATCAATTCCCAATAGATGCAACTCCCCCCAGCTTGGTTGAGTTACACCTGGAGCATATGGataatttgaaacaattgtggtGTGGTCCACTGCTGCATTGCTTCTTTGAAAAGTTACAAGTTCTTAAAATGGCCTACTGCATTCAATTGCGCAGCATCTTTCCAAGGCAATGTAACCTGCAGAATCTGAAGAGGCTCTCACTCTCCAAATGTCGAACACTGACATCTCTCTTCCCAATGTCTGTTGCTGGAACTCTGGTGAAGCTTGAATATCTAAGCATTACTGAATGCTCAGAATTGAGGCATATTATAAATAATGAACAAAAAGATGGCACAGATACAGGGGAGGTAATAGTTAATGTTCCAGACAATTTTCGTGTGATACTCCCTGAGCTGAAGGAACTTACCATCAGTTCTTGTGGCAAGTTAGAATTTATACTCCCAATTTCTTGTGTTGAAGGCCTTGTGCATCTGCGGAAGATACGGATTTCTGATGTTTTTAAGCTGAAATATGTTTTTGGACAAAATGACCATGAAGATCAATTATCTTACCTCAGCAGGACCAAGTTGGTGCCTCCACTTCGTTGTCTAGAAGAAGTAGAACTCGAGAGTCTCCCAAATCTTCTCAGTATTTTCTCAGAAAACTATCATTTGAGCTGGGAATGTCTGAGGAAACTAGTATGGAGAAATTGTCCCAAATTGAGTACAAATTCATCTTACAGTATGGATTTTGCTTCGGAAGATAGAGAGCTGCCTCCAAATCTGGGAGTTCACCTTGGAAAGGAATGCCTGATCTCAAAATTAGAATACTTGTCCTTGCTAAAAGTACATGAATTGAGGTTCATATGGACGGATTCCACTCTCACTCAAACTCTGAGCCTTCGGTATCTTCGATACTTAAGTGTGACTAACTGCAGAAATCTGAAATCCATCTTCTCTGTAGTTATCCAGAGAAGCCTGCCAGAGTTGTTGGAACTATATGTAGGAAACTGTGAGGAGCTGGAAGAAATTATTGCTGAGAACGAAGAAGATGATAATGTATCCACTGCTCAAGTGTGCTTTCCAAAACTTACAAGGATAGAGGTCAGGAGATGCAACAAATTGAAAAGCCTTTTCTCTACTGCCATAGCTAGAATGCTTCCACAACTAAGCATTTTAACCATAATTGATGCTCCTCAGTTAAAGGAGATTTTCAGACGTAGTAGTAAGGAAGGTGCTAATGATGAAGAGCTACTCATGCTTCCAAATTTGAAAGAAATAAGACTTGAAGAACTGAAAAGTCTTGTTGACGTAGGATTAGACACAAGGGGGCTTCGCAAGGTCATTAGTGAATGCCCAAGTATTCGGAGTGGCACTATTGATTCTGCTTGA 3954 0.3907 LNRAISSVLHLLPRIISSSIPAKQFLESDRPQREKLGIAIVVVVVKLEKENLAKLGYWGQMTEIIVSIVAKFSEYLVPLTIRQGQYLFCGHKITKCLEKEKKALASTRDSVQRRIEDASHRAEKVTDAVLGWLNDVKELIEEVELLEQEIEAHSSSCFRGKCPNRKRYSLCKKMEKKTKAMIQLNQKSEFEPFSQPAPIPDIEYFSSENFEYFQSTILAAGQLLEALQDDSGYIIGLYGMGGSGKTTLVKEVGKKAKELRHFDRVLFATVSHSPNIMKIQDEIAELLDLILDERSEAGRARRISMRLQSGERILIILDDVWAKLNLEEIGIPVDGNQKGCKVLLTTRRQDVCDLMDCPKRIPLNLLSEGEAWSLFRKHASIDEDALSSSNPLNDVQRKVCKECKGLPIAIVAVGSSLKGKSSAVDEWKVALQSLRDSKPMDVDEGVRDAFNCLKLSYEYLKSKEAKLLFLICSMFPEDHEILIDDLFKYGVALGICGECFDLARNRLRVCINKLVNSCLLMPCETSQVDLVFRRKNDRVKMHDMVRDVALWIASKDHPIMVNLAKDLNASIDNGAIKDCFALSSWNNNGIDKFPHGLDAPKLQILLLNLFGHRTPLRLTGPCELLEASFQGMKTLKVVALINKYIYQKVAISFPQSLQLLTNLRTLRLVGWDLGDISFVVSLKRLEILDLQESKFKQLPNGIENLNKLKLLDLSLCRIEESCLKIIRRCSQLEELYAFNYGDSSSLGITGPYECFEDDITSPSLQSYKLCIGPFMSHPSKMHSLTTRLLYINGFNPSASDVFVKYLLRRAQDVLLYNLHGGYRNIFPDTVQAVGCMNELTNLQLKNCSEMECLIDVTSSSADQFPIDATPPSLVELHLEHMDNLKQLWCGPLLHCFFEKLQVLKMAYCIQLRSIFPRQCNLQNLKRLSLSKCRTLTSLFPMSVAGTLVKLEYLSITECSELRHIINNEQKDGTDTGEVIVNVPDNFRVILPELKELTISSCGKLEFILPISCVEGLVHLRKIRISDVFKLKYVFGQNDHEDQLSYLSRTKLVPPLRCLEEVELESLPNLLSIFSENYHLSWECLRKLVWRNCPKLSTNSSYSMDFASEDRELPPNLGVHLGKECLISKLEYLSLLKVHELRFIWTDSTLTQTLSLRYLRYLSVTNCRNLKSIFSVVIQRSLPELLELYVGNCEELEEIIAENEEDDNVSTAQVCFPKLTRIEVRRCNKLKSLFSTAIARMLPQLSILTIIDAPQLKEIFRRSSKEGANDEELLMLPNLKEIRLEELKSLVDVGLDTRGLRKVISECPSIRSGTIDSA 1317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1870 1317 CDD AAA 219 363 - -
Sto9g1870 1317 Pfam NB-ARC domain 223 458 IPR002182 GO:0043531
Sto9g1870 1317 Gene3D - 365 455 IPR042197 -
Sto9g1870 1317 Gene3D Ribonuclease Inhibitor 817 1047 IPR032675 -
Sto9g1870 1317 Coils Coil 108 156 - -
Sto9g1870 1317 PANTHER - 826 933 - -
Sto9g1870 1317 PANTHER - 1207 1289 - -
Sto9g1870 1317 PANTHER - 983 1211 - -
Sto9g1870 1317 PANTHER - 84 736 - -
Sto9g1870 1317 PANTHER - 922 973 - -
Sto9g1870 1317 Coils Coil 1185 1205 - -
Sto9g1870 1317 Coils Coil 276 296 - -
Sto9g1870 1317 SUPERFAMILY L domain-like 540 1248 - -
Sto9g1870 1317 Gene3D Ribonuclease Inhibitor 553 756 IPR032675 -
Sto9g1870 1317 Gene3D - 456 550 IPR036388 -
Sto9g1870 1317 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 826 933 - -
Sto9g1870 1317 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 84 736 - -
Sto9g1870 1317 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 211 472 IPR027417 -
Sto9g1870 1317 Gene3D Ribonuclease Inhibitor 1104 1265 IPR032675 -
Sto9g1870 1317 Gene3D - 207 361 IPR027417 -
Sto9g1870 1317 PRINTS Disease resistance protein signature 919 935 - -
Sto9g1870 1317 PRINTS Disease resistance protein signature 234 249 - -
Sto9g1870 1317 PRINTS Disease resistance protein signature 403 417 - -
Sto9g1870 1317 PRINTS Disease resistance protein signature 307 321 - -
Sto9g1870 1317 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 1207 1289 - -
Sto9g1870 1317 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 922 973 - -
Sto9g1870 1317 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 983 1211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1870 Sto-Chr9 23045173 23051367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1870 235 556 WRKY Transcription Factor Family AT5G45050 25.460 7.16e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1870 - - lang:109341976 1111.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g1870 9 23045173 23051367 Sto9g1870 9 23045173 23051367 ECH