Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1817 ATGGACGCCGTCAACAAGCCCCAACCTCGATTCCAGCTGGGCAAGCAATCCTCGCTCGCGCCTGAACGTCAGGCTTCTGGCGCCGGCGCCGGCGATTTCGGATCGATGGCCTTGCCGTCGAGCGTGAGGCTCATGTACTTGGCGAACGAAGGGGATTCGGATGGAATCAAGGAGCTCTTGGACTCCGGAAGCGATGTTAATTTCAGAGACATTGATGATCGCACTGCTCTGCATGTCGCCGCGTGTCAGGGCCGCACCGATGTCGTCGAATTGTTGATCCGAAGAGGTGCAGAGATCGAGCCACGGGACCGCTGGGGTAGCACGCCTCTAGCAGATGCAATGTATTACAAAAATCATGATGTTGTAAAGCTTTTGGAGAAACATGGTGCAAAACCTCCGATGGCTCCTATGCATGTCCAAAATGCTCGTGAAGTCCCCGAATATGAGATTAACCCTTCGGAACTTGATTTTACAAATAGTGTTCACATAACAAAGGGAACTTTCCGTATTGCATTATGGCGTGGAACTCACGTTGCAGTCAAAATGCTTGGGGATGAAGTATTCACTGATGATGACAAAGTAAAGGCATTTCATGATGAACTTGCATTACTTCAGAAAATACGGCATCCAAATGTTGTCCAATTTTTAGGTGCAGTAACGCAAAGCACTCCAATGATGATTGTCACAGAATATCTACCTCAGGGAGATCTTTGTGCCTACTTGAAGAGGAGAGGTGCATTAAAACCAATAACAGCTTTGAAATTTGCACTTGACATTGCAAGGGGAATGAATTATTTGCATGAAAATAAACCAGAAGCTATTATACACCGGGATCTTGAACCTTCAAATATACTGCGGGATGATTCTGGGCATCTGAAAGTTGCAGACTTTGGGGTTAGCAAGTTGCTCAAAGTTGCAAAAACAGTCAAAGAGGACAAACCTGTGACTAGCCAGGATACATCATGGCGCTATGTTGCTCCCGAGGTCTTTAGGAATGAGGAGTATGACACCAAAgtggatgtattttcatttGCTTTGATATTGCAGGAGATGATTGAAGGTTGTCCTCCATTTCCTAAAATGCCGGAAAATGAAGTTCCTAAAGCATACGTTGCAAACGAGCGACCACAGTTTAAAGCTTCACCTAAGCTTTATGCTTATGGACTAAGAGAGTTAATCGAGGAATGTTGGGATAAAGATCCACACAGGAGACCAACGTTTAAGCATATAATTAAGAGACTGGAAGACATCAGTAACCTTCATGCTTATCAGAAGCGCTTGAAgGATTGCACCCCTACGTGCTTCTGGAATCTGAGGGCACTCTTTCAGCGGGATCGAACAAATCCGGGCAGCCAGTCATCTCGCTCAATGACCAGATAA 1380 0.4536 MDAVNKPQPRFQLGKQSSLAPERQASGAGAGDFGSMALPSSVRLMYLANEGDSDGIKELLDSGSDVNFRDIDDRTALHVAACQGRTDVVELLIRRGAEIEPRDRWGSTPLADAMYYKNHDVVKLLEKHGAKPPMAPMHVQNAREVPEYEINPSELDFTNSVHITKGTFRIALWRGTHVAVKMLGDEVFTDDDKVKAFHDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPQGDLCAYLKRRGALKPITALKFALDIARGMNYLHENKPEAIIHRDLEPSNILRDDSGHLKVADFGVSKLLKVAKTVKEDKPVTSQDTSWRYVAPEVFRNEEYDTKVDVFSFALILQEMIEGCPPFPKMPENEVPKAYVANERPQFKASPKLYAYGLRELIEECWDKDPHRRPTFKHIIKRLEDISNLHAYQKRLKDCTPTCFWNLRALFQRDRTNPGSQSSRSMTR 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1817 459 PIRSF ILK 2 436 - -
Sto9g1817 459 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 11 442 - -
Sto9g1817 459 MobiDBLite consensus disorder prediction 1 32 - -
Sto9g1817 459 PANTHER INTEGRIN-LINKED KINASE FAMILY PROTEIN 11 442 - -
Sto9g1817 459 SMART ANK_2a 72 101 IPR002110 GO:0005515
Sto9g1817 459 SMART ANK_2a 39 68 IPR002110 GO:0005515
Sto9g1817 459 SMART ANK_2a 105 134 IPR002110 GO:0005515
Sto9g1817 459 Gene3D - 36 145 IPR036770 -
Sto9g1817 459 Pfam Ankyrin repeats (3 copies) 44 132 IPR002110 GO:0005515
Sto9g1817 459 SUPERFAMILY Ankyrin repeat 43 135 IPR036770 -
Sto9g1817 459 CDD STKc_MAP3K-like 171 414 - -
Sto9g1817 459 ProSiteProfiles Ankyrin repeat region circular profile. 72 104 - -
Sto9g1817 459 SUPERFAMILY Protein kinase-like (PK-like) 173 437 IPR011009 -
Sto9g1817 459 Gene3D Transferase(Phosphotransferase) domain 1 233 440 - -
Sto9g1817 459 Gene3D Phosphorylase Kinase; domain 1 149 232 - -
Sto9g1817 459 ProSiteProfiles Protein kinase domain profile. 122 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g1817 459 ProSiteProfiles Ankyrin repeat profile. 72 104 IPR002110 GO:0005515
Sto9g1817 459 Pfam Protein tyrosine and serine/threonine kinase 174 414 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1817 Sto-Chr9 22630887 22641289 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1817 8 437 MAP Kinase Kinase Kinase AT4G18950 65.668 0.0 581
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Sto9g1817 PK_Tyr_Ser-Thr 2.8e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1817 - - gmx:100795964 753.051