Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1795 ATGGCTGTGGAAATTCCAGCAGCCGCATCTTCCATAGCTGTTGAAAGGGTAAGCCCTAAGACGGTTCAACAAGCTGTAAATTCTCTTCTCAAATGGAGAAATTCCAAGTCGCAGATCGAAAAACCCAAACTTTTCGATCAAGACGACGAATTCTTCTACCTCATCCTCACCCTCAAGAAAATCCCTCCGAAGGCTCGCGTCAAGCCTCACAAGGTTCTGCTTCCGAACTCTCTTGCGTTTGAATTCTCGGAGAACTTGTTGATCATCGATGACGGACCCAAGTCGAATCTTACCAAAGAGGACGTTCAGAAGAAGATCAAAGCTGAGAATATTCCCGTTTCTAAAGTTCTGAAGCTCTCGAAGCTCAAGGCTAATTATCGTCCTTTTGAGGCTAAGCGGAAGCTCTGTGATTCGTACACCATGTTTTTCTCTGATAAAAAGGTGATTCCTCTGTTGCCGCGGTTATTGGGTAAGCATTTctttaagaagaagaagattccTGTGCCGTTGGATTTGACGCATAAGAATTGGAAAGAGCAGATTGAGAAGGCAAACTCTTCAGCATTGTTGTTCCTCAGGACAGGTACGTGTTGTGTGGTGAAAGTTGCCAAAGTGTCAATGGAAGAGGATGAGATTGTTGCGAATGTGGTTGCCGCCATCAATGGGATTGTCGAGGTTGTACCGAAAAAGTGGGGGAATGTAAGGTCCTTTCATCTGAAGATGTTTGATTCACTTGCTTTGCCTCTTTATCAGACTGTTCCAGATTTGAAATTGAAGATTGAGGGAGCTAAGCTCGAGGAAGATGCTGAAAAGGAGGCTAAAGATATTGCTAAAAATGAGGCTAAGAAGGGTCTTAAAGTAGGTAAGAAGAGAGGGAGGATTCATGCAGTTCGGTACATGGATAATAATGTAGATGAAGAACCCAGTCAAGATGAGTTTGGTGATGAAGATGACGGGGTTACAGAGGAAGAAGATAATGAGAAAGATGAAATGAGTGGTGGTGAATTGGTggataagaagaaaaagaagagagttaAAATGGATAAAGGGGCTCTTAGTGAGCTGAATAGTgtgaaagaattgaagaaggcaCGCAAGAGTAAGGATAATAGTGTCAAACATGGGCTGTCTGCTAAAAGGAAGAAGGAAAATGTATTACCTTCTGAAGATGCAGAGTCTGgcaagaagaaaatgaagagaaGTGGAGTAGTTAAACCAGACGGTGGAAATATGAAAGTGAAAGCTAAGAAAAAGTAA 1257 0.3994 MAVEIPAAASSIAVERVSPKTVQQAVNSLLKWRNSKSQIEKPKLFDQDDEFFYLILTLKKIPPKARVKPHKVLLPNSLAFEFSENLLIIDDGPKSNLTKEDVQKKIKAENIPVSKVLKLSKLKANYRPFEAKRKLCDSYTMFFSDKKVIPLLPRLLGKHFFKKKKIPVPLDLTHKNWKEQIEKANSSALLFLRTGTCCVVKVAKVSMEEDEIVANVVAAINGIVEVVPKKWGNVRSFHLKMFDSLALPLYQTVPDLKLKIEGAKLEEDAEKEAKDIAKNEAKKGLKVGKKRGRIHAVRYMDNNVDEEPSQDEFGDEDDGVTEEEDNEKDEMSGGELVDKKKKKRVKMDKGALSELNSVKELKKARKSKDNSVKHGLSAKRKKENVLPSEDAESGKKKMKRSGVVKPDGGNMKVKAKKK 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1795 418 Gene3D - 181 246 - -
Sto9g1795 418 Coils Coil 260 280 - -
Sto9g1795 418 MobiDBLite consensus disorder prediction 306 331 - -
Sto9g1795 418 Pfam Ribosomal protein L1p/L10e family 45 244 IPR028364 -
Sto9g1795 418 SUPERFAMILY Ribosomal protein L1 16 250 IPR023674 -
Sto9g1795 418 PANTHER RIBOSOMAL L1 DOMAIN-CONTAINING PROTEIN 1-LIKE 11 254 - -
Sto9g1795 418 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 11 254 - -
Sto9g1795 418 MobiDBLite consensus disorder prediction 332 403 - -
Sto9g1795 418 Gene3D - 97 180 IPR016095 -
Sto9g1795 418 MobiDBLite consensus disorder prediction 301 418 - -
Sto9g1795 418 CDD Ribosomal_L1 22 249 IPR028364 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1795 Sto-Chr9 22433583 22435076 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1795 138 240 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 32.039 2.84e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1795 K14775 - zju:107427461 413.69