Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1794 ATGGCCGTCGGCAAGAACAAGAGGATTTCCAAGGgtaaaaaaggaggaaagaagaaGGCTGCCGATCCATTCGCCAAGAAGGATTGGTATGATATTAAGGCTCCTTCCGTGTTCCAGGTTAAGAACGTTGGCAAGACTTTGGTCACCCGTACTCAGGGAACCAAGATTGCTTCAGAAGGACTGAAGCACAGAGTATTTGAGGTCTCATTGGCTGATCTCCAAGGTGATGAGGACCACGCATACAGGAAGATCCGTTTGAGGGCTGAAGATGTTCAAGGAAAGAACGTCCTGACAAATTTCTGGGGAATGGACTTTACAACTGACAAGCTGAGGTCATTGGTTCGCAAATGGCAAACATTAATTGAAGCTCATGTAGATGTGAAGACCACTGACAACTATACTCTTAGGATGTTTTGCATTGGCTTTACAAAGAGGCGTGGAAACCAGGTCAAGAGGACCTGCTATGCACAATCTAGCCAGATCAGAAATATCCGCAGGAAGATGAGGGAAATCATGGCTACCCAAGCAACATCCTGCGACTTGAAAGAGTTGGTACGAAAATTCATTCCTGAGATGATCGGTAAGGAGATCGAGAAGGCAACATCAAGCATCTACCCTTTGCAAAATGTGTTCATTCGCAAAGTCAAGATCTTGAAGGCTCCCAAGTTCGATCTAGGGAAACTAATGGAAGTTCATGGTGATTACTCAGAAGATGTGGGTGTGAAGGTAGACAGACCGGCAGATGAGTCCATGGAGGCGCCAACTGAAATTGTTGGTGCTTGA 783 0.4483 MAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFQVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQGDEDHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRGNQVKRTCYAQSSQIRNIRRKMREIMATQATSCDLKELVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADESMEAPTEIVGA 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1794 260 ProSitePatterns Ribosomal protein S3Ae signature. 61 73 IPR018281 GO:0003735|GO:0005840|GO:0006412
Sto9g1794 260 Pfam Ribosomal S3Ae family 16 221 IPR001593 GO:0003735|GO:0005840|GO:0006412
Sto9g1794 260 MobiDBLite consensus disorder prediction 1 20 - -
Sto9g1794 260 MobiDBLite consensus disorder prediction 1 15 - -
Sto9g1794 260 Hamap 40S ribosomal protein S1 [RPS3A]. 1 260 IPR027500 GO:0003735|GO:0005840|GO:0006412
Sto9g1794 260 PANTHER 40S RIBOSOMAL PROTEIN S3A 1 259 - -
Sto9g1794 260 PANTHER 40S RIBOSOMAL PROTEIN S3A 1 259 - -
Sto9g1794 260 SMART Ribosomal_S3Ae_2 15 221 IPR001593 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1794 Sto-Chr9 22419581 22421802 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1794 1 260 Cytoplasmic Ribosomal Protein Gene Family AT4G34670 86.641 2.75e-163 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1794 K02984 - gmx:100813273 457.218