Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1779 ATGGAAAGAGATCAAGATCAAGACAAGGGGAAGAACCAAAACAGGCCAAGCAATGACATCCCAAAGGCGGTCTCCCCGGTTTCTTTCGCGGCCGAGGATCCGGAAACCGGGGGCCGGCGTCCGCGTGGCCGGCCGGCCGGGTCCAAAAACAAGCCCAAACCACCCATTATAGTCACTAGGGATAGTGCCAATGCACTTAGGGCTCATGCACTTGAAGTCACATCAGGGTGTGACATCAATGAGAGTTTGCTCAATTTTGCAAGGAGGAAACAACGTGGGATTTGCATACTAAGTGGCACCGGCTGTGTGACAAATGTCACACTACGCCAACCGGCCGCCCCGGGCGCAACCGTGACCCTCCACGGCCGGTTCGAGATTCTCTCATTGCTGGGGTCGATCCTCCCACCACCAGCACCCCCGGGGATCACCGGTCTAACCATTTACCTAGCCGGGGCCCAGGGGCAGGTTGTGGGTGGTGCTGTGGTGGGTGCTCTGGTTGCCTCAGGTCCTGTGGTGGTCATGGCTGCATCATTCATGAATGCTACTTTTGATCGTTTGCCATTAATGGAGGATGATCATGAGATCAATGGGCAGAATAATCAGCATTACCAGAATGGAAGAAGCCTTAATCATAATCataaccatcatcatcatcttgatGTGTCAGATTTGTATGGAATGCCACAGAATTTGCTCACTAATGGTGGTGTGCCTCCTGAGATATACTCTTGGACACCTGGGAGGAACTTCTCAAAAGCATGA 762 0.5157 MERDQDQDKGKNQNRPSNDIPKAVSPVSFAAEDPETGGRRPRGRPAGSKNKPKPPIIVTRDSANALRAHALEVTSGCDINESLLNFARRKQRGICILSGTGCVTNVTLRQPAAPGATVTLHGRFEILSLLGSILPPPAPPGITGLTIYLAGAQGQVVGGAVVGALVASGPVVVMAASFMNATFDRLPLMEDDHEINGQNNQHYQNGRSLNHNHNHHHHLDVSDLYGMPQNLLTNGGVPPEIYSWTPGRNFSKA 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1779 253 MobiDBLite consensus disorder prediction 1 56 - -
Sto9g1779 253 ProSiteProfiles PPC domain profile profile. 63 201 IPR005175 -
Sto9g1779 253 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 17 252 IPR014476 GO:0003680
Sto9g1779 253 PIRSF ESCAROLA 1 251 IPR014476 GO:0003680
Sto9g1779 253 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 16 17 252 - -
Sto9g1779 253 CDD DUF296 67 149 IPR005175 -
Sto9g1779 253 Pfam Plants and Prokaryotes Conserved (PCC) domain 67 179 IPR005175 -
Sto9g1779 253 MobiDBLite consensus disorder prediction 1 15 - -
Sto9g1779 253 Gene3D - 66 202 - -
Sto9g1779 253 SUPERFAMILY AF0104/ALDC/Ptd012-like 63 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1779 Sto-Chr9 22300471 22301232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1779 3 248 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 65.854 2.16e-98 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1779 - - qsu:111990161 333.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g1779 9 22300471 22301232 Sto9g1779 9 22300471 22301232 ECH