Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1776 ATGACAGTTGAGGCTCTAATTCCTTTACTCGAGTGCGATATGGAAGCTGTGAATGAAAAATGTTCAGCCTCCCTAAGCAATGAAATGAAGAAGCAAGACATTCAGAAAATTCATCCCTCCTGGGATAAGATTCAGGGAGGGGAACTTTGGAATAATGGACTCATTTGTGCTTTTGAATTCATCCCTGGATCTCGGAAGATGAAGTCAACAGACGCAGTTAAAGAGGTGGCGAAAAGAAATAATAGTAGATACTGCTCTAATGAATCTTCCTTACCAGTTGAATCTGGAGTTGGCCATCTGGATGCTATAGATGGCCAGGATGATGAGTCACGGCATATCTTAGGCAGAGAAGGTCTTCCAAGGAACTACTGGAGACCAATTGGTTGGGCAAGAATTTCTGAGCTTGTCCAGACAGTGCACACTGATGCTGACTGGGCCTCACAGTTGCTTGATTTCTCAGAAGATGAAAGTGATGTTACTATTGCAGAAGTAACAACTCCTTACTGGGAACGGCCTGTGGGTCCAACTTGGTGGTGTCATGTGGATGCAGGCCATCCATTTATTAGTGCATGGTTAAGTAGTGCTCAATGGCTTCATCCTGCTATTAGAATTGCTTTGCAAGAAGAAAGTAAATTAATCAGTGAGAGAATGAAATACCTTCTGTATGAGGTTCCTGTTCGAGTTGCTGGTGGACTACTATTTGAACTTCTTGGGCAGTCTGCTGGTGATCCTTTTGTTGAGGAAGATGATATCTCCATTGTTTTACGAGCTTGGCAGGCACAAAACTTTTTGGTGACAGCTTTGCATGTTAAAGGCTCTGCATCAAATGTTAATGTGTTAGGTATTATAGAAGTTCAGGAAGTGCTTGCTGCTGGGGGTACTAAAATACCACACTGCATTCATGAGCTTGTAGCTCACCTAGCTAGTCGTCTTGCTCGATGGGATGATAGGTTGTTCCGTAAACACATATTTGGGGCTGCAGATGAAATTGAGTTGATGTTTATGAACAGGAGGAACCATGAGGACTTGCACCTTTTCAGTATAATATTGAACCAAGAAATTAGAAGATTTTCATCTCAGGCTATAAGAGTTAAATGGTCACTGCATGCACGAGAGGAAATTGTTTTTGAACTTCTTCAGCAGTTGAGAGGAAATGAAACGAGATCCTTGCTTGAAGGAGTAAGAAAGAGTACTAGAGAGATGATAGAGGAGCAAGAAGCAGTTCGTGGTCGCTTATTCACAATTCAAGATGTCATGCAGAGCACAGTGCGTTCATGGTTGCAGGACAAAAGTCTCAGAGTGACTCATAATTTAGGAGTGTTTGGGGGAGGTGGCCTTATTCTCTCCGTCATCACTGGcttgtttggtataaatgtGGATGGAATACCTGGAGCTGCTGACACTCCATATGCATTTGCTCTATTCTCTGGCCTCCTCTTTTTGTTAGGAGCTTTGCTAATTGGAACTGGATTGCTTTATCTTGGGTTGAAGAAACCCATCATTGAAGAAAATGTCGCAGTGAGAAAACTGGAGCTTCAAGAGCTGGTCAAGATGTTTCAACATGAAGCAGAATCACATGCACAACTGCGAAATACAGTTCCTCATAAGGACATTCCTCAAACAGAAGCAGTGGAAGAACCCCTTCTCTCCCAGAAACTGGGAGGAATGGTAGGagagtcatcatcatcatcaaacaGGCCATCACCCATTAGAGACTTCCGATCATCTTACATTGATCTCATTACCAATGAAGAAGTCATTCAGATCCTTACCACACCCAAGACTAGCCCTTCTTATTTGAACCTCATAGCCAACttgaagagaaagaaggaatTCGTCCATCGCTCACACTCTGCtccatcagttttcactaacaTAAAGGAAGATTGCCCTGATCCCTTTGACCCCAGAATTGCACAAAAGTCATCACCTTTTATAGTGAGGTTATCTTCCATAGGTGTCATCTTGTATGTGTCAATTGGGGTTTTAGTTTACTTAACAAGTGATGGTTTCAAGGGCACATCCACGTTTAAGCTTGTGGATGCAATGTACTTCACAATGGTAACTCTTTGCACTATTGGGTATGGAGATATAGTTCCTGATACTGATCTAACCAAAATCTTCACTTGTGGTTTCATTCTTGTGGGTTTTGGGCTTGTGGGTATTTTGCTAAACGGGTTGGTTACCTATATTTGTGATAGACAGGAGGCAATGTTATTGAGCACCATGGATGAGAATCAATTCCATACAATGGTTAGGTATCTTATGGTTGataaagagaaaggaaggaTGAGGATACGAACTAAAGTGAGCTTGGCTTTGGCTATAGTTATTTGTTGCATTGCCATTGGAACAATTGCGGCTTATTTTCTTGAGAATTTGAGTTGGGTGAACAGTTTTTATCTCTCTGTTACTTCTGTTACAACAGTGGGTTATGGGGATTATGCTTTTAAGACTCTCCAAGGAAGGTGTTTTGCAATAATATGGCTATTGGTGAGCACACTGGCAGTAGGTAGGGCATTTCTATACCTTACTGAATATAGTATTGACAAGAGAAATCGTACTATTACAAATTGGATTCTTCATAAAAAGATTACCTTGTCAGATTTAGTGGCTGCTGACCTCGACAATGATGGATCAATCAGTAAGTCTGAATTTGTCATATACAAGCTTAAGGAGATGGGGAAGATAACTGAGATTGACATTCAGCAAATAAGCAAACAATTTGATTCTTTGGACAGCACCAAATGTGGCAAGATCACTCTTGCTGGCCTCATGGAAACCGTTTAA 2790 0.4025 MTVEALIPLLECDMEAVNEKCSASLSNEMKKQDIQKIHPSWDKIQGGELWNNGLICAFEFIPGSRKMKSTDAVKEVAKRNNSRYCSNESSLPVESGVGHLDAIDGQDDESRHILGREGLPRNYWRPIGWARISELVQTVHTDADWASQLLDFSEDESDVTIAEVTTPYWERPVGPTWWCHVDAGHPFISAWLSSAQWLHPAIRIALQEESKLISERMKYLLYEVPVRVAGGLLFELLGQSAGDPFVEEDDISIVLRAWQAQNFLVTALHVKGSASNVNVLGIIEVQEVLAAGGTKIPHCIHELVAHLASRLARWDDRLFRKHIFGAADEIELMFMNRRNHEDLHLFSIILNQEIRRFSSQAIRVKWSLHAREEIVFELLQQLRGNETRSLLEGVRKSTREMIEEQEAVRGRLFTIQDVMQSTVRSWLQDKSLRVTHNLGVFGGGGLILSVITGLFGINVDGIPGAADTPYAFALFSGLLFLLGALLIGTGLLYLGLKKPIIEENVAVRKLELQELVKMFQHEAESHAQLRNTVPHKDIPQTEAVEEPLLSQKLGGMVGESSSSSNRPSPIRDFRSSYIDLITNEEVIQILTTPKTSPSYLNLIANLKRKKEFVHRSHSAPSVFTNIKEDCPDPFDPRIAQKSSPFIVRLSSIGVILYVSIGVLVYLTSDGFKGTSTFKLVDAMYFTMVTLCTIGYGDIVPDTDLTKIFTCGFILVGFGLVGILLNGLVTYICDRQEAMLLSTMDENQFHTMVRYLMVDKEKGRMRIRTKVSLALAIVICCIAIGTIAAYFLENLSWVNSFYLSVTSVTTVGYGDYAFKTLQGRCFAIIWLLVSTLAVGRAFLYLTEYSIDKRNRTITNWILHKKITLSDLVAADLDNDGSISKSEFVIYKLKEMGKITEIDIQQISKQFDSLDSTKCGKITLAGLMETV 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1776 929 Pfam CorA-like Mg2+ transporter protein 353 487 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Sto9g1776 929 PANTHER MAGNESIUM TRANSPORTER CORA-LIKE FAMILY PROTEIN 7 547 - -
Sto9g1776 929 Pfam Ion channel 654 731 IPR013099 -
Sto9g1776 929 Pfam Ion channel 776 845 IPR013099 -
Sto9g1776 929 SUPERFAMILY Voltage-gated potassium channels 759 864 - -
Sto9g1776 929 Gene3D - 751 860 - -
Sto9g1776 929 Gene3D - 636 750 - -
Sto9g1776 929 PANTHER MAGNESIUM TRANSPORTER CORA FAMILY PROTEIN 7 547 - -
Sto9g1776 929 PRINTS Two pore domain K+ channel signature 688 716 IPR003280 GO:0005267|GO:0016020|GO:0071805
Sto9g1776 929 PRINTS Two pore domain K+ channel signature 808 817 IPR003280 GO:0005267|GO:0016020|GO:0071805
Sto9g1776 929 SUPERFAMILY Voltage-gated potassium channels 643 731 - -
Sto9g1776 929 Gene3D Magnesium transport protein CorA, transmembrane region 443 498 - -
Sto9g1776 929 ProSitePatterns EF-hand calcium-binding domain. 874 886 IPR018247 -
Sto9g1776 929 SUPERFAMILY EF-hand 872 925 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1776 Sto-Chr9 22284287 22293167 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1776 613 927 Ion Channels AT4G18160 50.633 1.02e-98 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1776 - - adu:107496492 755.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g1776 9 22284287 22293167 Sto9g1776 9 22284287 22293167 ECH