Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1774 ATGCTCATTGAGTCTCTATCGGTTCCGAGGGAAGTTCGTCTGAGCTTAGATCAATACCAAGGTGGGGATGCCTTaattgcagaagcagaagaactTGGAGGGCGAAATCTGTTGACTATAGTGCTGATTCTTTGTTTTATATCTATGTGGGCAATGTTTTGGAGAAAGTCGAGCCGTTCTCTGAAGAAATACTCTGCATCCCAAGTACCATATACCTTGAAAGATATCAAGGTTGATAAGGTTGGAGCAGAGAATTCTCATAGTCACCCTGAAAGTGTATTTATTCCTTTTCATGACAAGGCAAGTGATAAGAATTCAGACAGGGTGTTAGTTCAGTCCGGCATGAGTAAATCCAGTGATGCTGATAATATCAGTCAGTGCAGTTCAATATATCATCATGAGAGAGGAGGTAGTTCGATTTCAGGCGAAGATGGGAGCTCTGGAGCCGGTAGAAAGCACTCTACATTATCATATGGAGGGATGGTGACTGCCTCCCCTTTAGTTGGCTTGccggaattttctcatcttgggTGGGGCCACTGGTTTACTCTTAGAGATCTGGAACTTGCAACGAATCGTTTCTCGGCAGAGAATGTGATAGGTGAGGGTGGATATGGGGTTGTTTACAGGGGAAGACTGATCAATGGGTCTGAGGTGGCTGTGAAGAAAATTCTTAATAACTTGGGACAAGCGGAGAAAGAATTCAGGGTTGAAGTGGAGGCTATAGGTCATGTTCGGCATAAAAATCTCGTGCGCTTGCTTGGATATTGCATTGAAGGAGTTCACAGGTTGCTGGTGTATGAGTATGTGAATAACGGTAACTTAGAACAATGGTTACATGGGGCTATGCGTCAACATGGGACCCTCACCTGGGAGGCCCGCATGAAAGCTATACTCGGCACAGCCAAAGCGCTTTCATATTTGCATGAAGCAATAGAACCAAAAGTTGTTCACCGAGATATAAAGTCTAGCAACATTTTGGTCGATGATGAGTTCAATGCGAAGGTTTCTGATTTCGGCTTGGCCAAACTCTTGGATTCAGGAGAAAGTCACATAACAACTAGAGTCATGGGAACATTTGGCTATGTGGCACCAGAATATGCAAATACTGGATTGTTAAATGAGAAGAGTGACGTTTACAGCTTTGGTGTTCTACTTCTGGAAGCAGTTACTGGAAGGGACCCTGTAGACTATGCACGACCTGCTAATGAGGTTAATCTTGTTGAATGGCTCAAGATTATGGTTGGTGCAAGAAGAGCTGAAGAAGTGGTGGACCCTAGCCTCGAAGTTAAACCATCAACGCGTGCTTTGAAGCGTGCCCTTCTGGTTGCACTAAGGTGTGTTGATCCTGATGGAGAAAAGAGACCCAAAATGAGTCAGGTTGTGAGGATGCTTGAAGCTGACGAATATCCATTCCGTGAGGATCGGAGGAACCGCAAGAACCGCACACCGAGCATGGAAATAGAATCCGTGAAGGACCTTTCTGGACGAACCGATGCTGAGAAGATACCGGAGGACTCCGAGAGCCATATGCCAGACTCAACCCAAGGGTATGATTGA 1560 0.441 MLIESLSVPREVRLSLDQYQGGDALIAEAEELGGRNLLTIVLILCFISMWAMFWRKSSRSLKKYSASQVPYTLKDIKVDKVGAENSHSHPESVFIPFHDKASDKNSDRVLVQSGMSKSSDADNISQCSSIYHHERGGSSISGEDGSSGAGRKHSTLSYGGMVTASPLVGLPEFSHLGWGHWFTLRDLELATNRFSAENVIGEGGYGVVYRGRLINGSEVAVKKILNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRLLVYEYVNNGNLEQWLHGAMRQHGTLTWEARMKAILGTAKALSYLHEAIEPKVVHRDIKSSNILVDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVLLLEAVTGRDPVDYARPANEVNLVEWLKIMVGARRAEEVVDPSLEVKPSTRALKRALLVALRCVDPDGEKRPKMSQVVRMLEADEYPFREDRRNRKNRTPSMEIESVKDLSGRTDAEKIPEDSESHMPDSTQGYD 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1774 519 Gene3D Phosphorylase Kinase; domain 1 176 269 - -
Sto9g1774 519 Pfam Protein kinase domain 196 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g1774 519 SUPERFAMILY Protein kinase-like (PK-like) 178 470 IPR011009 -
Sto9g1774 519 Gene3D Transferase(Phosphotransferase) domain 1 270 483 - -
Sto9g1774 519 ProSitePatterns Protein kinases ATP-binding region signature. 200 223 IPR017441 GO:0005524
Sto9g1774 519 SMART serkin_6 194 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g1774 519 MobiDBLite consensus disorder prediction 133 152 - -
Sto9g1774 519 CDD STKc_IRAK 200 466 - -
Sto9g1774 519 PANTHER RECEPTOR-LIKE KINASE PLANT 40 513 - -
Sto9g1774 519 MobiDBLite consensus disorder prediction 470 509 - -
Sto9g1774 519 MobiDBLite consensus disorder prediction 470 519 - -
Sto9g1774 519 PANTHER OS01G0323000 PROTEIN 40 513 - -
Sto9g1774 519 ProSiteProfiles Protein kinase domain profile. 194 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g1774 519 ProSitePatterns Serine/Threonine protein kinases active-site signature. 316 328 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1774 Sto-Chr9 22263845 22267447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1774 171 468 Trihelix Transcription Factor Family AT1G70460 49.505 1.92e-92 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Sto9g1774 Pkinase 4.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1774 - - zju:107416135 781.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g1774 9 22263845 22267447 Sto5g4070 5 49393441 49394103 CCT
Sto9g1774 9 22263845 22267447 Sto9g1774 9 22263845 22267447 ECH