Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1759 ATGGCTGAGGCTTTTCTTGGCATTTTGGTAGAGAACTTGAACTCTTTCGCCCGTGCTGAGCTCGCAACATTCTGCGGCGTCGGTGGAGAGATCGAGAGGCTAACCAATTCTCTCACACAGATTCAGGCCGTGATTGAAGATGCCGAGAAGAAGGAGATAACAAGCTCATCCATAAGGGATTGGCTGCAGAAACTTAAAGATGCAGCTCACGTGCTCGACGATATTCTTGATGAGTATTCCGTACGCTCAACTCCTCCACAGTACAATTCCTCTATTAGACCAAACAACATACGGTTTCGTTATCGTATTGGCAAGAAGTTGAAGGAGATCTCACAGAGATTAGATCAAATTGCAAAAGATATGAGGGATTATGATTTTGTTGTGCGTGAAGTGATGAGAGAAAGGCCGATCCATGAAATTCCTGAACGGCCTCAAACTGGCTTTGTTGTTGATCAATCACAAATATACGGAAGAGATGGTGATAAAGACAAGATCGTGGAGCTTCTTCTTGGGCAAGATCATGACAGCCTTTTCGTGTATCCAATTGTGGGGCTTGGTGGGCTTGGAAAAACAACACTTGCTCAGTTGGTCTTCAATGATCCAAGGGTAATCAAGCATTTTGGTGCCTTGAGAATTTGGGTCTGTATTTCTGATGACTTCTCCGAGATAAGGATTCTGCAATCTGTCATGGAATCTATCACAAGTGAAAGGTGCGACACCTCGAATCTAGCTACACTACAAAAGAGAGTTCAAGAAAAGCTTCAAAATGAGAGGTATTTGCTTGTTCTAGATGATGTGTGGAACCAAGACCAAAACAAATGGTATCAATTAAATCAAGACAAATGGAATCAACTGAGATCTGTGCTAGCATTTGGATCAAAGGGTGCTTCAGTGTTGGTCACCACACGTGATTTGGATGTTGCATCCATCATGGGTAATCACCCTCCCTATCATTTGTCTCTTTTATCTGAGGATGAATGTTGGTTATTATTCAAGCAACGTGCATTTATTGATGACAAAGAGGCTAGTCCACAGCTTGAAGAAATAGGGAAGGAGATTGTGAAGAAGTGTGGGGGTTTGCCACTTGTAGCTAAAGCATTGGGAAGCCTTTTGCACTCAAAAAGTGATGAAAAACAGTGGCTTGAAGTGAAAGAAATTGAGCTTTGGAATCTATCACTTGAAAATTTCATTTTGTCTACTTTAAGATTGAGCTACTTTAGTTTAACACCAGCCTTGAGGCGGTGTTTTGCTTTTTGTGCTATATTTTCCAAAGATGAAATTATCGGTAAGGAGGAATTGATTCATCTTTGGATGGCAAATGGGTTCATCTCATCTCGAGAAAACTTGGAAATTGAGGATGTTGGTAATGAAATTTGGAATGAATTGTACAAAAATTCATTCTTTCAAGAAGTCACAATTGATGATGATGGTTGCACTAAATTCAAGATGCATGCTTTAATTCATGATCTGGCCCAATCCATTACGAAGAAAGAGTGTTCTGTCATAAAGGGTGGAGACATAACCAATTTACCAAGAAGCACACACCATATAAAGTACGTTGGTGATGGCCTTACATTTAACAAGAAAGACATAACAAATGTTGAGTCCTTGCGaacattttttaatatgaatcaTGGTTCTGAATTAGATTTTGGGAAGTTTCAAGTACAATCACTCAGAGTATTGTCCACTAATTCCCCTAAGCTGCCATCATTATCTTATCTAATACACTTGAGGTACTTGGCAATACATGATTTGGGTATAGATACCATTCCCACGTCAATTTGTAGCTTGCGGAGATTGGAAATCTTGAAATTTATACATTGTGTTAAGCTGCGTTCTCTTCCAGAAGGCTTAGCCAACTTGCAGAATCTCAGACATCTGATTATTTTAAGATGTTCAGCATTATCCCATATGCCCCCGAGCATTGGGAAACTATCTGGCTTAAGAACTTTAAGTTTGTTCATTGTGAGATCTGAGAAAGGGCATAGCTTGAAAGAGTTACATGGCCTAAAGCTACGTCAAAGAGAATTGAGCATCAAAGGGCTTGAGTGTGTCGGTAGTGTAGATGAAGCTAAAGGGGTGAATTTGATTGGAATAGAAGAGCTTCGGGTTCTAAGCTTGTCATGGGACAACAGTAAAGAGATTGAAATGAAAGCAGTGGGTGTTGATGCAGAGCAAGTGATGGAAGCCCTTCAACCTCATTCAAACCTCAAGAAATTGGAGGTACGCGGGTACAAAGGATCACACTTCCCCAGTTGGATGAAAGATGTTTCTAATTTAGTTTCTCTACAGCTTCAAGATTGCAGCAACTGTGTGCAACTTCCAGCACTTGGTAAACTACCATCTCTAGAAACACTTTCCATAGTGAATATGGCATGTGTGGAATacttggatgatgatgaatgttatgATGGCGTGGAGGTGAAAGCTTTCATATCTTTGAAAACACTCGAATTATATGGCATGCCAAAGTTAGAGAGGTTGTTGAAAAGAGAAGGAGGGGAGATGTTCCCACATCTTCATATATTGTACATTTCTAGTTGTCCAAAACTGACGTTGTCATGCCTTCCATCTGTTGAAGAGCTCAACTTAGGTTACAGCAAAGAAGAATTAGTAAAGTCAATTTCTAATCTGCATGGGCTTAAGTGGTTGAATATCACAGAAGAGCTCGACTTAGGTTACGGCAAAGAAGAATTAGTAAAGTCAATTTCTAATCTGCATGGGCTTAAGTGGTTGAATATCACAGGAGGCTCAAAGCTGCCAACTCAACTCCCTGCTTTGGAGATACTAGATTTGAATGGTTGTGATGAGCTTGAGTGTATTCCAGAGAAAGTGTTGGAAGCTATAAACTCTCTTCGAACTTTGCGTATTAGCAAGTGCAGAGCATTGAAGTGTTTGCCTGAAGCTATTCAACACCTCACTTCACTTGAGTGTTTGATTATAAGGGATTGTCCAATATTGGAAGAGAGATGTAAGGAAGGGAGTGGAGAAGACTGGCACAAGATACAACATATtccaaatataaatatagaatGA 3039 0.3965 MAEAFLGILVENLNSFARAELATFCGVGGEIERLTNSLTQIQAVIEDAEKKEITSSSIRDWLQKLKDAAHVLDDILDEYSVRSTPPQYNSSIRPNNIRFRYRIGKKLKEISQRLDQIAKDMRDYDFVVREVMRERPIHEIPERPQTGFVVDQSQIYGRDGDKDKIVELLLGQDHDSLFVYPIVGLGGLGKTTLAQLVFNDPRVIKHFGALRIWVCISDDFSEIRILQSVMESITSERCDTSNLATLQKRVQEKLQNERYLLVLDDVWNQDQNKWYQLNQDKWNQLRSVLAFGSKGASVLVTTRDLDVASIMGNHPPYHLSLLSEDECWLLFKQRAFIDDKEASPQLEEIGKEIVKKCGGLPLVAKALGSLLHSKSDEKQWLEVKEIELWNLSLENFILSTLRLSYFSLTPALRRCFAFCAIFSKDEIIGKEELIHLWMANGFISSRENLEIEDVGNEIWNELYKNSFFQEVTIDDDGCTKFKMHALIHDLAQSITKKECSVIKGGDITNLPRSTHHIKYVGDGLTFNKKDITNVESLRTFFNMNHGSELDFGKFQVQSLRVLSTNSPKLPSLSYLIHLRYLAIHDLGIDTIPTSICSLRRLEILKFIHCVKLRSLPEGLANLQNLRHLIILRCSALSHMPPSIGKLSGLRTLSLFIVRSEKGHSLKELHGLKLRQRELSIKGLECVGSVDEAKGVNLIGIEELRVLSLSWDNSKEIEMKAVGVDAEQVMEALQPHSNLKKLEVRGYKGSHFPSWMKDVSNLVSLQLQDCSNCVQLPALGKLPSLETLSIVNMACVEYLDDDECYDGVEVKAFISLKTLELYGMPKLERLLKREGGEMFPHLHILYISSCPKLTLSCLPSVEELNLGYSKEELVKSISNLHGLKWLNITEELDLGYGKEELVKSISNLHGLKWLNITGGSKLPTQLPALEILDLNGCDELECIPEKVLEAINSLRTLRISKCRALKCLPEAIQHLTSLECLIIRDCPILEERCKEGSGEDWHKIQHIPNINIE 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1759 1012 Gene3D - 140 314 IPR027417 -
Sto9g1759 1012 CDD RX-CC_like 2 119 IPR038005 -
Sto9g1759 1012 Pfam Rx N-terminal domain 5 92 IPR041118 -
Sto9g1759 1012 Gene3D - 411 493 IPR036388 -
Sto9g1759 1012 PANTHER DISEASE RESISTANCE PROTEIN RP 32 857 IPR044974 GO:0006952
Sto9g1759 1012 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 419 IPR027417 -
Sto9g1759 1012 Pfam NB-ARC domain 159 385 IPR002182 GO:0043531
Sto9g1759 1012 Gene3D - 6 121 - -
Sto9g1759 1012 SUPERFAMILY L domain-like 482 853 - -
Sto9g1759 1012 Gene3D Ribonuclease Inhibitor 512 658 IPR032675 -
Sto9g1759 1012 Coils Coil 31 51 - -
Sto9g1759 1012 Gene3D Ribonuclease Inhibitor 663 856 IPR032675 -
Sto9g1759 1012 Gene3D Ribonuclease Inhibitor 857 995 IPR032675 -
Sto9g1759 1012 PRINTS Disease resistance protein signature 179 194 - -
Sto9g1759 1012 PRINTS Disease resistance protein signature 253 267 - -
Sto9g1759 1012 PRINTS Disease resistance protein signature 357 371 - -
Sto9g1759 1012 PRINTS Disease resistance protein signature 923 939 - -
Sto9g1759 1012 Gene3D - 321 409 IPR042197 -
Sto9g1759 1012 PANTHER OS05G0414200 PROTEIN 32 857 - -
Sto9g1759 1012 SUPERFAMILY RNI-like 812 992 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1759 Sto-Chr9 22118229 22153742 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1759 182 503 WRKY Transcription Factor Family AT5G45050 26.074 3.02e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1759 - - mtr:MTR_5g071220 939.873