Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1754 ATGACAGAGAGAAGTATGGAGATAGtgaatgataatgataataataagaagaaggaaggtgacgatcaagaagaaaaagaagaagaagaagaagaagaagaaatagtgCTTCCTGGGTTCAGATTCCATCCTACAGATGAAGAGCTTGTAGGGTTTTACCTGAGAAGAAAGGTAGACAAGAAGCCTCTTCGGATCGAACTCATCAAGCAGATTGATCTTTACAAATACGATCCTTGGGATCTTCCAAAAGAAGCAAGTAGTGGTAGTGTGGGGGAGAAAGAGAAGGAGTGGTACTTTTTCTGCAAAAGAGGGAGGAAATATAGGAATAGCATAAGGCCAAATAGGGTTACAGGATCAGGATTTTGGAAGGCCACAGGAATAGATAAAGCTATTCACAGTGTGAAGAAAGagggtaataataataattatgatgatgatgaggagtCTATTATTGGGCTCAAGAAATCTTTGGTGTATTATAGAGGAACTGCTGGAAAAGGCACCAAAACCGACTGGATGATGCATGAGTTTCGTCTCCCTCCTGCCTCCAATGCTAATCGTGATGCCAACCCTAATCATCTTCAAGAAGCTGCTAACCACAGGAATATCCAAGCTGGTTCCTTCGGTTTCTGGTGCTACTTCCCTTACATCGGCTACCCTTGCCTCCGTTGCCTGGATATCGCTCCATTCATTGTCCCCTACTGGCCGGACATGCACCTGATCTGTTGTCATGTGGACTACATTCTCCGCAGCATGTTCACATATGCAAGAAGCTCCTGTTTCTCTTTTAAGGCTGCTGATTCTCTCTGTGAAGCCTCCTTTGTCCGAGCCTCAGCATTTGACTCAGCAACCCTTACCTTCTCTTCTGCCCTTACAACGGCGGCTTCTAAGATCACATCATGCTCTCTGGCTTTTGCCAGCTCAGAACGCCACATATTTGCTTCCTGA 948 0.403 MTERSMEIVNDNDNNKKKEGDDQEEKEEEEEEEEIVLPGFRFHPTDEELVGFYLRRKVDKKPLRIELIKQIDLYKYDPWDLPKEASSGSVGEKEKEWYFFCKRGRKYRNSIRPNRVTGSGFWKATGIDKAIHSVKKEGNNNNYDDDEESIIGLKKSLVYYRGTAGKGTKTDWMMHEFRLPPASNANRDANPNHLQEAANHRNIQAGSFGFWCYFPYIGYPCLRCLDIAPFIVPYWPDMHLICCHVDYILRSMFTYARSSCFSFKAADSLCEASFVRASAFDSATLTFSSALTTAASKITSCSLAFASSERHIFAS 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1754 315 MobiDBLite consensus disorder prediction 1 35 - -
Sto9g1754 315 Pfam No apical meristem (NAM) protein 38 179 IPR003441 GO:0003677|GO:0006355
Sto9g1754 315 ProSiteProfiles NAC domain profile. 36 201 IPR003441 GO:0003677|GO:0006355
Sto9g1754 315 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 17 196 - -
Sto9g1754 315 PANTHER CONTAINING PROTEIN 9, PUTATIVE, EXPRESSED-RELATED 17 196 - -
Sto9g1754 315 SUPERFAMILY NAC domain 36 186 IPR036093 GO:0003677|GO:0006355
Sto9g1754 315 Gene3D NAC domain 45 203 IPR036093 GO:0003677|GO:0006355
Sto9g1754 315 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1754 Sto-Chr9 22067461 22076082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1754 22 193 NAC Transcription Factor Family AT5G39820 60.465 1.47e-69 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto9g1754 NAM 9e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1754 - - gmx:100810472 247.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g1754 9 22067461 22076082 Sto9g1754 9 22067461 22076082 ECH