Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1753 ATGGGACAGTTTGACATCAGTAAAGCTTCGAAGAGCATACCTGTAAAAAGAGATAAGGTTTCAATACTCATAAAGGTTAGCAAAAAGCCTAAGATCATCCGAGCCAGCTCCATCAGAGTTAAGCTTCCACCATCCAACTTGAGGCAGAATGTGAGGGATTGTACTACTTGCGGGCTTAAATTGGAACTCACAACGCAATTCAGGAGGAGCACCCTATTAGGGTTTCTCCATCCCAATGCTTCTCCCTTACTCAAATCCTTTGCTTCACTTGTACCCATATCTCAATCAGATCTACCTCAACAAAAACAAGAAGGCAATGAATCGTTTCCAGTTTCTTATCTCATGAACTCGTGTAGCTTGTCGGCCAAAGACGCTATTGATGTATCCAAAAGGGTTCATTTTAAAGACTCAAAAAATCCCGATTTGGTACTTAATCTCTTGAGGAGCTACGGATTCTCACAAACCCACATATCTAAATTAGTGAAATATCTTCCGTCGACGCTTCTGGTAAATCCTGAGAGGACCCTTTTGCCCAAGCTAAGGTTTTTTAGGTCTATAGGGATTTCATCTTCTGAACTTCCGAAACTCATCATTACTAACCCTGTACTCTTAAATTGTAGCTTAGAGAATCGTATAATTCCCCGCTTTGAAGCCCTTAAGAGTGTGCTTGGTCCCCATGAGAAACTGAATGTAACTTCACGACGCACGGGATGGAAATTTCTCAACAAAGAGGTGGCGGATATTTTTCCAAACATAAAGCTTTTGAGAGAGCTAGGAGTGCCTCAATCTTCAATCACACTATTTGTCACTTGTTTTACAAGTTTAGCATTTACGAAACATGAAAAGTTTGTTGAACTTGTCATGTTTGCTAAGGAAACAGGAATTCAACCTTGTAAGGCTACGTTCATCGATGCACTTTATGTCTTGTCAGCTACAAAGAAATCGACCTGGGTATCGAAGATGAAAGCTTTTGAGAGGTGCGGCTGGTCCAGGGATTTAGCCCTTTTAGTATTCAAGAAGTATCCGCGTTGCATGCTGCGATCAGAAGAGAAAATCACAAGCACCCTGAAGTTCCTTATGGATGAAATGCATATAAGGATGGAAGAGATAGCAAAATGCCCGGCAGTTTTTGGCTATGGCGTGAAGCGGAGGATTATTCCTAGATTTTCTGTAGttcaatttttgaaaatgaaGGGTTTGATCAATACTAATCCGTCATTTTCTTCCATTGTTGCAATAAGTGAGAAAAAATTTCGGGAGAAATTTGTTACCAAATTTCAGGAAAGGGTTCCTCAGTTATTGAACATCTATAAAGGTGTTGAAGAACGGCCTTTACCTGAAGCTTAG 1347 0.4024 MGQFDISKASKSIPVKRDKVSILIKVSKKPKIIRASSIRVKLPPSNLRQNVRDCTTCGLKLELTTQFRRSTLLGFLHPNASPLLKSFASLVPISQSDLPQQKQEGNESFPVSYLMNSCSLSAKDAIDVSKRVHFKDSKNPDLVLNLLRSYGFSQTHISKLVKYLPSTLLVNPERTLLPKLRFFRSIGISSSELPKLIITNPVLLNCSLENRIIPRFEALKSVLGPHEKLNVTSRRTGWKFLNKEVADIFPNIKLLRELGVPQSSITLFVTCFTSLAFTKHEKFVELVMFAKETGIQPCKATFIDALYVLSATKKSTWVSKMKAFERCGWSRDLALLVFKKYPRCMLRSEEKITSTLKFLMDEMHIRMEEIAKCPAVFGYGVKRRIIPRFSVVQFLKMKGLINTNPSFSSIVAISEKKFREKFVTKFQERVPQLLNIYKGVEERPLPEA 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1753 448 SMART mt_12 367 401 IPR003690 GO:0003690|GO:0006355
Sto9g1753 448 SMART mt_12 335 366 IPR003690 GO:0003690|GO:0006355
Sto9g1753 448 SMART mt_12 158 189 IPR003690 GO:0003690|GO:0006355
Sto9g1753 448 SMART mt_12 194 225 IPR003690 GO:0003690|GO:0006355
Sto9g1753 448 PANTHER CGI-12 PROTEIN-RELATED 84 439 IPR003690 GO:0003690|GO:0006355
Sto9g1753 448 Pfam mTERF 312 418 IPR003690 GO:0003690|GO:0006355
Sto9g1753 448 Pfam mTERF 144 353 IPR003690 GO:0003690|GO:0006355
Sto9g1753 448 Gene3D Transcription termination factor 3, mitochondrial 115 233 IPR038538 -
Sto9g1753 448 Gene3D Transcription termination factor 3, mitochondrial 234 429 IPR038538 -
Sto9g1753 448 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 84 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1753 Sto-Chr9 22052217 22054531 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Sto9g1753 mTERF 1.5e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1753 K15032 - qsu:112035834 324.709