Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1752 ATGCTTAACGTTTTGATTACGAGACTATCTGCATCACAACCATGCAAGAGGAGAACCCTATTGGGGTTTCTCCTTCCCATTGCTTCCCCCATTGCCAAATCATTTGCTTCACTTGTAGAACGATCCGAATCAAATCAAGCAGAAGGAAATGAATCGTTTACAGTTTCTTATCTCATGAAATCATGTGGCTTATCGGCTAATGTAGCTATTGATGTATCcaaaagggttaaattgaaaGACCCAGATAAACCCGACTCCGTACTTAGTCTTTTGAGGAGATACGAATTCTCAGAAACCCAGATATCTAAATTAGTGAAAAAGCACCCATATGTGCTTCTGGCGAATCCTGAAAATACCCTTTTGCCCAAGCTAAGGTTTTTACAGTCTATAGGGTTTTTATGTTCAGAACTCGCAGAACTTATTGTTCGTTCTCCTTTATTCCTAAAGTGGAGCTTAGAGGAGCGTGTGATTCCGCTATATGAGGCCCTTAAGAGTGCACTTAATGACGATGAGAAATTATATATAGCTTTAAGGCGCTTACGTTGGTATTTTCTCCAACACGGTGTAATGAATTTAGCTCCAAACATAAAGTTTTTGAGAGAACACGGCATACCCCAATCTTCTATCACTAAACTGTTAACTAATTACACAAGTTTAGCATTTATGAAGCATGCAAAGCTTGTTGAACATGTCAAGTTTGCTAAGGAAACAGGAATGGAACCTTTTAAGCCTACGTTCATCCTTGCAATTCATGTGTCAGCAACAACAAAGAAATCGACCTGGAAGTCAAAGCTGGAGATCTTCGAGAGGTGCGGCTGGTCCAGGGATGTCACTCTTTCAGTTTTCAGGAAGTTTCCAATTTGCATGTATCTGTCAGAGGACAAAATCAGAAGTACCATGAAGTTCCTTGTGGATGAAATGCATATGACGCTGGAAGAGATAGCTAAATACCCTGCAGTACTTGGCTATAGCTTGAAGCAGAGGATTATTCCTAGATGCTCTGtagttaaaattttgaaaatggaGGGTTTGATAAATTATGATAACTCCTTATATTACTATCTTATGATGAGTGAGAAAATGTTTCTGGAGAAATTTGTGATCAGGTTGCAAGTAAGTGTTCCTCAGCTGTTGAACATCTATAAAGTTCTTGTTTTGACCGAGGATTGTGAAGTCAAATCGGAACGGCCTGAACAATTGGGTTATGTTTTCCTACAACTACTGTGTGCTCAGTTCTTGCTGTTTGTTGTGGCTTTTGTTTTGGTACAAGACAAAGATTGA 1281 0.3849 MLNVLITRLSASQPCKRRTLLGFLLPIASPIAKSFASLVERSESNQAEGNESFTVSYLMKSCGLSANVAIDVSKRVKLKDPDKPDSVLSLLRRYEFSETQISKLVKKHPYVLLANPENTLLPKLRFLQSIGFLCSELAELIVRSPLFLKWSLEERVIPLYEALKSALNDDEKLYIALRRLRWYFLQHGVMNLAPNIKFLREHGIPQSSITKLLTNYTSLAFMKHAKLVEHVKFAKETGMEPFKPTFILAIHVSATTKKSTWKSKLEIFERCGWSRDVTLSVFRKFPICMYLSEDKIRSTMKFLVDEMHMTLEEIAKYPAVLGYSLKQRIIPRCSVVKILKMEGLINYDNSLYYYLMMSEKMFLEKFVIRLQVSVPQLLNIYKVLVLTEDCEVKSERPEQLGYVFLQLLCAQFLLFVVAFVLVQDKD 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1752 426 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 42 383 - -
Sto9g1752 426 SMART mt_12 244 274 IPR003690 GO:0003690|GO:0006355
Sto9g1752 426 SMART mt_12 210 240 IPR003690 GO:0003690|GO:0006355
Sto9g1752 426 SMART mt_12 174 205 IPR003690 GO:0003690|GO:0006355
Sto9g1752 426 SMART mt_12 29 65 IPR003690 GO:0003690|GO:0006355
Sto9g1752 426 SMART mt_12 102 133 IPR003690 GO:0003690|GO:0006355
Sto9g1752 426 SMART mt_12 138 170 IPR003690 GO:0003690|GO:0006355
Sto9g1752 426 SMART mt_12 311 345 IPR003690 GO:0003690|GO:0006355
Sto9g1752 426 SMART mt_12 279 310 IPR003690 GO:0003690|GO:0006355
Sto9g1752 426 Coils Coil 420 426 - -
Sto9g1752 426 Pfam mTERF 88 240 IPR003690 GO:0003690|GO:0006355
Sto9g1752 426 Pfam mTERF 258 363 IPR003690 GO:0003690|GO:0006355
Sto9g1752 426 PANTHER CGI-12 PROTEIN-RELATED 42 383 IPR003690 GO:0003690|GO:0006355
Sto9g1752 426 Gene3D Transcription termination factor 3, mitochondrial 169 372 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1752 Sto-Chr9 22037161 22039301 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Sto9g1752 mTERF 2.9e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1752 K15032 - qsu:111984734 333.954