Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1747 AtgcttaattttcttattacaCGATTATCTTCGTCACTGCCATTCTCGACGAGGACCCAGCTAGGGTTTCTCCATCGCAATGCTTCACGCACTTTCAATCCGTTTTCTTCTGTTGCGAAATTATCTGAATCAAAACAAGAAACACAGAAACAAGTAGGAAATGATCCGTTTACAGTTTCTTATCTCATGAACTCATTGGGCATGTCCTCGAATGTAGCTATTGAAGTGTCCAAAAGGGTTCAATTGAAAGGCCCAGAAAATCCTGATTCGGTGCTTATTCTTTTGAGgagtTACGGTTTCTCAGACACGCAGATATCCAGGATTGCGAGATTGTTTCCAAAAGTGCTTTCGGCAAATCCTGAGAAAACCCTTTTACCCAAACTTAGGTTTATCCAATCTATAGGGTTTTCAAGTTCTGAACTCCCACAACTAGTCAGTTCTAACTGTATATTTCTTTCATGGAGCTTAAAGAAACGGATAATTCCCCTTTATGAGGCCCTTAAGAGTGTACTTGATGAAGATCAGAAAGtaaatatagttttaaaatgCCCAAGATGGACATCTGTATACAACGAGGTAACAAATGTTGTTCCAAACATAAAGATTTTGAGAGAGCATGGAGTGCCTCAATCTTCTGTCACTCTACTGGTAGCTTCTTATTCAAGTATAGCATTTATGAATCATTCCAAGTTAGTTGAACATGTCAAGTTTGCTAAGGAATTAGGAATCGAGCCATTTAGGGCAACGTACATTGATGCAATTCATGTCTTGTCAATTACGAAGAAATCGACTTGGGAATCAAAGCTGGATATCTATGAGAGGTGCGGCTGGTCCAGGGATGTCACTCTTTCAGTATTCAGGAAGTATCCATTATGCATGGTGCGTTCAGAGGAGAAAATCATGAGTACCATGAAGTTCCTTGTGGATGAAATGCATATGACGCCGGAAGAGTTAGCTAAATGCCCAGCAGTACTTGGCTATAGCTTGAAGCAGAGGATTATTCCTAGATGCTCAGTAGTTCAATTTTTGAAGATGAAGGGTTTACTCAATAATGATAACtccttatattattttcttaaaaagagtGAGAAAGAATTTGTGGAGAAATTTGTGGTCAGATTTCAGGAAAGTGTTCCTCAGCTATTGAGCATCTATAAAGGTCATGTAGAACCTGTACCACAAACTCAATGA 1191 0.3778 MLNFLITRLSSSLPFSTRTQLGFLHRNASRTFNPFSSVAKLSESKQETQKQVGNDPFTVSYLMNSLGMSSNVAIEVSKRVQLKGPENPDSVLILLRSYGFSDTQISRIARLFPKVLSANPEKTLLPKLRFIQSIGFSSSELPQLVSSNCIFLSWSLKKRIIPLYEALKSVLDEDQKVNIVLKCPRWTSVYNEVTNVVPNIKILREHGVPQSSVTLLVASYSSIAFMNHSKLVEHVKFAKELGIEPFRATYIDAIHVLSITKKSTWESKLDIYERCGWSRDVTLSVFRKYPLCMVRSEEKIMSTMKFLVDEMHMTPEELAKCPAVLGYSLKQRIIPRCSVVQFLKMKGLLNNDNSLYYFLKKSEKEFVEKFVVRFQESVPQLLSIYKGHVEPVPQTQ 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1747 396 Gene3D Transcription termination factor 3, mitochondrial 177 377 IPR038538 -
Sto9g1747 396 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 26 389 - -
Sto9g1747 396 Pfam mTERF 93 307 IPR003690 GO:0003690|GO:0006355
Sto9g1747 396 Pfam mTERF 259 366 IPR003690 GO:0003690|GO:0006355
Sto9g1747 396 PANTHER CGI-12 PROTEIN-RELATED 26 389 IPR003690 GO:0003690|GO:0006355
Sto9g1747 396 SMART mt_12 142 174 IPR003690 GO:0003690|GO:0006355
Sto9g1747 396 SMART mt_12 106 137 IPR003690 GO:0003690|GO:0006355
Sto9g1747 396 SMART mt_12 177 209 IPR003690 GO:0003690|GO:0006355
Sto9g1747 396 SMART mt_12 283 314 IPR003690 GO:0003690|GO:0006355
Sto9g1747 396 SMART mt_12 315 349 IPR003690 GO:0003690|GO:0006355
Sto9g1747 396 SMART mt_12 214 244 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1747 Sto-Chr9 21947700 21992635 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Sto9g1747 mTERF 3.3e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1747 K15032 - qsu:112035834 328.176