Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1745 atgatgaaggaTTCTCCGAGAACCGGCGTCCGGCCGTACCACAAATCAGAACTTCCTCGCCTCCGGTGGACACCGGAACTCCATGAACACTTTGTTGAAGCTGTGGAAACTCTTGGTGGAAGAGAGAAGGCAACCCCAAAGCGTATTTTGCAGATGATGCGTGTGAAAGGATTAAGCATCTCTCACATTAAAAGCCATCTTcaggtacatatatatatatatatatatattctttttcttcatcaataa 249 0.3775 MMKDSPRTGVRPYHKSELPRLRWTPELHEHFVEAVETLGGREKATPKRILQMMRVKGLSISHIKSHLQVHIYIYIYILFLHQ 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1745 82 Gene3D - 18 72 - -
Sto9g1745 82 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 4 69 IPR044848 GO:0003700
Sto9g1745 82 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
Sto9g1745 82 SUPERFAMILY Homeodomain-like 19 72 IPR009057 -
Sto9g1745 82 Pfam Myb-like DNA-binding domain 21 70 IPR001005 -
Sto9g1745 82 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 19 70 IPR006447 GO:0003677
Sto9g1745 82 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 4 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1745 Sto-Chr9 21930107 21930788 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1745 9 70 G2-like Transcription Factor Family AT1G14600 67.742 7.01e-26 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sto9g1745 Myb_DNA-binding 4.1e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1745 - - vvi:100855381 115.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g1745 9 21930107 21930788 Sto9g1745 9 21930107 21930788 ECH