Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1736 ATGTCAGAAACCAAAACTCTCACTCAATTTTCCACTAAAGTTCCATCTTTTTGGCTAATTCCCTTCATATTCCTCTGTTTTTGTGTGAATCCTTCTTGTTCCCAAGTTGCTTCAGGAGATCCCACTGAAGAAATTGCTCTCTTGAATTGGAAATCCAGCCTTGATGAAGCAAGCCAAGCCACCTTGTCTTCTTGGAGGAATGGCACAAGTCCTTGCACAGATAATTGGAAAGGGATCACATGTAATGAATCCACCATGACAACATCAATCTCCATGATCAATCTCACAAGCCTTGAGCTACAAGGTAAGCTTCAAAGCCTAAGCTTCTCTTCCTTCCCTAACCTCAAGCTTTTGGATATTAGTAACAATTTGTTCTATGGAAACATTCCCCCTCAAATTGGTAACTTGTCAAGTATTTTGACATTGGATATGAGTGGGAATCCTTTGGGGGGTCAGATTCCTAGTGAGATAGGGAAATTGAGCACTCTAGAGCTTCTTCATCTTGGGATATGCAATCTCACTGGGTCTATTCCCAAAGAGATTGGGGACTTGAGGAATTTGaaggatctaatgctcgaaacCAACTTTCTTTCGGGTGTCATTCCTCGAGAAATCGGAATGCTGAGTAATCTTGTGATGCTTGATTTGTCAGAAAATGCTTTGCTATCTGGTACAATTCCTTCTATAATTGGAAACTTGAGCAAGTTAGAATTGCTTTACCTCTATAATGATAGTTTTGTTGGTGTCATTCCTAATGAGCTTGGGAACCTCTTATCTCTTACCGTAGCTCAATTGTTTGGTAATAACTTTGAAGGTCCAATTCCACCCTCTTTGGGAAACTTGACAAATCTTGTTGATTTGAAGTTGTCATTAAACAAACTTTCTGGACCAATTCCTTCCTCCTTAGGAAACTTGATCAATTTGGACCAACTTGGCCTTTTTCACAACAATCTTTCTGGACCTATTCCTTCTTCCATTGGGAATTTGACAAAGCTCACTTCTTTGCAATTGTTTGAGAACAAATTCAGTGGTAGTCTTCCACCTGAATTGGAAAAACTTACCAATTTGGAAAACTTGCAACTTGGTGACAATGATTTCACAGGTCATTTGCCTCAAAATATTTGCCTAAGTGGGTCATTAGTGAGGTTTAGTGCTTCCCCCCGTAATCGTTTCACCGGTCCGATCCCAAGAAGCTTGAAGAATTGCTCTAGCCTTGTTAGACTTAGGCTTGACGATAACCAATTGGTTGGAAATATAACAGAAGATTTTGGGGTGTATCCAGATTTAGGCTACATGAATTTGAGTGGCAATAATTTGTTTGGCCACCTATCATTAAACTGGGGAAAGTATAGTAGTCTATTAACACTTGATATTTCCAACAACAATCTTTCTGGTAGCATACCACCGGAACTAGGAGAGGCGACGATGTTGCAACGAATCCACCTCTCTTCAAATAATTTGAATGGGGAAATTCCAAAAGAATTGGGGAAATTGAGTTCACTAGAGGGTCCTCTTCCGAACAACGATGCCTTTCGTGACATCGGATTCGAAGAATTGAGGAACAATTCAGGCTTATGTGGTGATGTTCCGGGCTTAGATCATTGCAAAGAAGATAGTAATAATTCACATGGCCAAAAGAGCAAAAAAGTGAAGCTACTGCTGATATTGTTCCTCACTTTGGGTGCATTAGCTCTAATAGCAATTGGAGGTTCATACATCATTTTCTGTAGAAGTGCAAGAAAAGTTGACAAACAAGATGAAGAAGCACAATCTCAGGATTTTCACTTTGTATGGAGTTCTGATAGGAAAATCATGTACCAAAATGTCATTGAAGTCACAAAGTTTTTTGATAAGAGATATCTCATTGGCAAGGGAGGCCAAGGGAGTGTCTACAAGGCAGAGCTGTCCACAGGTCACATTGTTGCTGTGAAGAAGCTCCATTCAATGCCGGATGGAGAAATCTCTGACTTCAAAGCATTCACGAGTGAGGTCCGAGCCTTGACCGAGATCAAACACCGTAACATCGTGAAGCTGTACGGGTTTTGTTCGAATTCGCAGGTCTCTTTCTTGGTTTATGAGTTCTTGGAAGGTGGTAGCTTGGACAACATTTTGAAGAATGGTAAAGAAGCTGTTGAACTTGATTGGCATAAGAGGGTGAATATTGTAAAAGGGGTGGCTAATGCTTTGTTCCATATGCATCATGGATGCTCATTTTCTGTAGTTCATCGTGACATATCAAGCAAGAATGTTCTTCTGGATTCGGAGTATGAAGAAGTTCGTCTCATTGACTTTGGAACGGCCAAGTTTCTGAAGCCTGATTCAAACAATATGACCACATTTGCAGGCACTTTTGGGTATGCTGCTCCAGAGATTGCTTACATAATGGAAGTGAACGAGAAATGTGATGTTTATAGCTTTGGAGTTCTGACATTGGAAATCATCATGGGAATGCATCCAGGAGAACTCATTGCTTCTTTGACAGAAACACCAGCAACCTATGACTTGCCATTGAAGGATTTGCTGGATCAACGACCACCTCAGCCTGCAAATTCAAATGTTGAAGAAGAGGTTATGTTGATTGCCAAAATAGCATTTGCTTGCTTGAATGAGAATCCACAACTTCGTCCCACCATGGAACAAGTGTCCAATGAGCTTGTCATGCCAAAATTGCCTTTAGTGGATCAATTCCCAACAATCACCATCCGACAACTATTGAATGactga 2724 0.4023 MSETKTLTQFSTKVPSFWLIPFIFLCFCVNPSCSQVASGDPTEEIALLNWKSSLDEASQATLSSWRNGTSPCTDNWKGITCNESTMTTSISMINLTSLELQGKLQSLSFSSFPNLKLLDISNNLFYGNIPPQIGNLSSILTLDMSGNPLGGQIPSEIGKLSTLELLHLGICNLTGSIPKEIGDLRNLKDLMLETNFLSGVIPREIGMLSNLVMLDLSENALLSGTIPSIIGNLSKLELLYLYNDSFVGVIPNELGNLLSLTVAQLFGNNFEGPIPPSLGNLTNLVDLKLSLNKLSGPIPSSLGNLINLDQLGLFHNNLSGPIPSSIGNLTKLTSLQLFENKFSGSLPPELEKLTNLENLQLGDNDFTGHLPQNICLSGSLVRFSASPRNRFTGPIPRSLKNCSSLVRLRLDDNQLVGNITEDFGVYPDLGYMNLSGNNLFGHLSLNWGKYSSLLTLDISNNNLSGSIPPELGEATMLQRIHLSSNNLNGEIPKELGKLSSLEGPLPNNDAFRDIGFEELRNNSGLCGDVPGLDHCKEDSNNSHGQKSKKVKLLLILFLTLGALALIAIGGSYIIFCRSARKVDKQDEEAQSQDFHFVWSSDRKIMYQNVIEVTKFFDKRYLIGKGGQGSVYKAELSTGHIVAVKKLHSMPDGEISDFKAFTSEVRALTEIKHRNIVKLYGFCSNSQVSFLVYEFLEGGSLDNILKNGKEAVELDWHKRVNIVKGVANALFHMHHGCSFSVVHRDISSKNVLLDSEYEEVRLIDFGTAKFLKPDSNNMTTFAGTFGYAAPEIAYIMEVNEKCDVYSFGVLTLEIIMGMHPGELIASLTETPATYDLPLKDLLDQRPPQPANSNVEEEVMLIAKIAFACLNENPQLRPTMEQVSNELVMPKLPLVDQFPTITIRQLLND 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1736 907 Gene3D Ribonuclease Inhibitor 40 223 IPR032675 -
Sto9g1736 907 Pfam Protein kinase domain 619 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g1736 907 Gene3D Phosphorylase Kinase; domain 1 576 694 - -
Sto9g1736 907 SUPERFAMILY L domain-like 196 502 - -
Sto9g1736 907 Gene3D Ribonuclease Inhibitor 258 539 IPR032675 -
Sto9g1736 907 SUPERFAMILY L domain-like 50 276 - -
Sto9g1736 907 Pfam Leucine rich repeat N-terminal domain 43 82 IPR013210 -
Sto9g1736 907 Gene3D Transferase(Phosphotransferase) domain 1 695 890 - -
Sto9g1736 907 ProSiteProfiles Protein kinase domain profile. 616 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g1736 907 SUPERFAMILY Protein kinase-like (PK-like) 594 885 IPR011009 -
Sto9g1736 907 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 32 501 - -
Sto9g1736 907 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 500 904 - -
Sto9g1736 907 ProSitePatterns Tyrosine protein kinases specific active-site signature. 740 752 IPR008266 GO:0004672|GO:0006468
Sto9g1736 907 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 32 501 - -
Sto9g1736 907 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 500 904 - -
Sto9g1736 907 SMART LRR_typ_2 450 474 IPR003591 -
Sto9g1736 907 SMART LRR_typ_2 281 305 IPR003591 -
Sto9g1736 907 SMART LRR_typ_2 353 377 IPR003591 -
Sto9g1736 907 SMART LRR_typ_2 329 352 IPR003591 -
Sto9g1736 907 SMART LRR_typ_2 112 136 IPR003591 -
Sto9g1736 907 SMART LRR_typ_2 208 233 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1736 Sto-Chr9 21826451 21830573 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1736 100 789 Receptor kinase-like Gene Family AT4G08850 39.326 1.89e-146 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto9g1736 Pkinase 5.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1736 - - mtr:MTR_0365s0020 704.131