Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1734 ATGGTGATTCTCTACATATTCTTGTGTGTCTCTGTGAAGTTGTGTGATTCTAAGGTTACAAGAGATGATCTCAGTGAAGCAAATGCTCTTTTGAAGTGGAAATCCAGCCTTCACAGCCAAAGCCAAGTAACCTTGTCTTCCTGGAACAATGGAACTAACCATTGCAAAACTTGGAAAGGAATTGCATGTGATCCAATATCTATGTCCGTTTCTATGATAAATCTCACAAGTCTTGGGCTGAAAGGTACACTCCACTCTCTCAACTTCTCATCTTTCCCTCACCTCCAAGTTCTGGATGCAAGTTTCAATTCCTTTGAGGGTCCTGTCCCTAGAGAAGTAGGGAATTTGAGGGATTTTAGAAGCCTGATTCTTGAATCGAATCAACTCTCTGGTTCCATTCCCCAGGAGATTGGAATGTTGAATAATCTTCAGATACTTAATCTGTCTGTGAATGCTTTATCTGGGAGGATCCCTTCTTCAGTTGGAAACTTGAGTAAGTTACAACAACTTGATCTTCATTCCAACAATCTCAATGGTTCCATTCCTCATCAGCTTGGGGAAATCAGTTCCCTTAGAATTTTCAGATTATGGGATAATAAACTCTTGGGGCCAATTCCATCTTCCATAGGAAATCTCACAAAACTCACCAGATTGTCCTTGTACAATAACATGCTTTCTGGAACAATTCCACATTCCATTGGGAACTTGGTTGATTTGCATCTTCTCAACCTTGGGGAGAACAACATCTCTGGACCTATTCCTTCCACCATAGGAAACTTGACAAAGCTCTCATATTTGTCCTTGTACTTGAACAACCTCAGTGGTCGTATTCCACTAGAAATGAATAACCTCACAAGTTTGTCTTACTTCCTACTATTTGAGAATGCTTTCACTGGCCATTTGCCACAACACATATGCCTTGGTGGGTCATTAAAAGGGCTTGTTGTTCATAAAAACCATTTTACTGGTCCAATTCCATCAAGCTTGAAGAATTGCTCTTGCCTTCATAGAGCTAGGCTTGAGCAAAACCAGTTGGTAGATAATATAACCAATGCTTTTGGTGTGTACCCAAGTTTGAATTACATTGATCTGAGTGCCAATAAATTGTATGGCCACATTTCATCCAATTGGGGCAAGTGTGGTAATCTCACAAGCTTGGTGATTTCCAACAACAATATTTCTGGTGGTATACCACCAGAAATAGGTGAAGCCACAAATCTTCAAAGACTTGATCTTTCTTCAAATAACCTAAGTGGGGAAATTCCAAAGGATCTAGGGAAGTTAACCTTGTTGATTGAACTCTATTTGAGCAACAATAAATTCTCAGGCAGTGTTCCCACAGAGATAGGATTACTGAAAGATCTTCGAAGATTGAATCTTGCAGCAAACGATTTCAGTGGCTCGATCACACCGCAGATTGTGGAAGGCTTGCCCAACTTGTTGAGTTTGAATTTGAGCAAAAATGCATTCCAGGAAagcattccctctaacattggCAAAATGTCTTCCCTTCAAGTTCTTGATCTCAGTTGGAATGTTTTGAAGGGAAGAATACCAGAAACACTTGGAGAGTTAACAAAGTTGGAAGTGCTGAACATCTCACGTAACAATCTCACTGGCATAATCCCATCAAGTCTTAAAAATATGGTAAGCTTAACTTCTGTTGACATATCATATAACCAATTAGTGGGTTCCCTTCCAGAAAATCAAATCTTCTGTAACATCACATTTGATGCATTGAGGAATAATGCAGGCTTGAATAGTAATGTCTCTAGCTTGGAATTCTGCAAAAAAGTCCAGAATAACCCACAATATGGTCACAACAGCAAAGAGTTCAAGCTATGGATATTATTCCTAACTCTGGGCCTACTAATGCTGGTGGTTGGAATTCTATTAATTGTCTATCGAAATgcaagaaaaaccaaaaatcaaGTGGGACATATTCAAGATCTTTTTATGATATGGAATTCAGAAAGAGAAATCATGTATAAACATATCATTGATGCCACAAAAGCATTTGATGGCAAATATCTCATAGGCAAGGGGAGCCAAGGATGTGTTTACAAGGCTGAGCTGCCTACAGGTGAGGTTGTTGCAGTGAAAAAGCTTCATTCCATGTCAGATGGGGAAATCTCCAACCTAAAAGCTATGACAGCTGAGATTCAAGCTTTGACAGAAATCAAACATCGTAACATTGTTAAGTTATATGGGTTTTGTTCGAATCCACGATTCTCCTTTTTGGTTTATGAGTTCTTGGAAGGTGGCAACTTGAGCATCATATTGAAGAATCAGAACCAGGCATCTAAGCTTGATTGGATGAAGAGAGTCAACATTGTAAAAGGAGTAGCTAATGCATTATCCTACATGCATCATGGCTGCTCACTTCCTATAGTTCATCGTGACATATCGAGCAAAAATGTCGTTCTAGATTCGGAATTCAAAGAAGTTCGCGTCATTGACTTCGGAACAACCAAGTTCTTGATGCCCGATTCGAACAACATAACCGAGTTTGCTGGAACCTTTACATATGCTGCTCCAGAGATTGCTTACACTATGAAAGTGGACGAGAAATGTGATGTTTATAGTTTTGGAGTGCTGACATTGGAAATCATTATTGGAGAACATCCGGGAGAGCTTATTTCTTCTTTGGTAGGGACATCAACAGCTTATAATTTGCCATTGAAGGTTGTGTTGGACCAACGACTTCCTCATCCCACAAAATCAACTGTTGAGGAGGTGATCTCAATTGCAAAAGTAGCATTTGCCTGTTTGAGTGAGAATCCACCATCTCGTCCCACAATGGAACAAGTATCTAATGAGCTTTTGATGTCTATATCACAATTAGATGATGCATTATCATTCCACACTATCACACTTGGACAACTcatgaaaatttga 2898 0.3882 MVILYIFLCVSVKLCDSKVTRDDLSEANALLKWKSSLHSQSQVTLSSWNNGTNHCKTWKGIACDPISMSVSMINLTSLGLKGTLHSLNFSSFPHLQVLDASFNSFEGPVPREVGNLRDFRSLILESNQLSGSIPQEIGMLNNLQILNLSVNALSGRIPSSVGNLSKLQQLDLHSNNLNGSIPHQLGEISSLRIFRLWDNKLLGPIPSSIGNLTKLTRLSLYNNMLSGTIPHSIGNLVDLHLLNLGENNISGPIPSTIGNLTKLSYLSLYLNNLSGRIPLEMNNLTSLSYFLLFENAFTGHLPQHICLGGSLKGLVVHKNHFTGPIPSSLKNCSCLHRARLEQNQLVDNITNAFGVYPSLNYIDLSANKLYGHISSNWGKCGNLTSLVISNNNISGGIPPEIGEATNLQRLDLSSNNLSGEIPKDLGKLTLLIELYLSNNKFSGSVPTEIGLLKDLRRLNLAANDFSGSITPQIVEGLPNLLSLNLSKNAFQESIPSNIGKMSSLQVLDLSWNVLKGRIPETLGELTKLEVLNISRNNLTGIIPSSLKNMVSLTSVDISYNQLVGSLPENQIFCNITFDALRNNAGLNSNVSSLEFCKKVQNNPQYGHNSKEFKLWILFLTLGLLMLVVGILLIVYRNARKTKNQVGHIQDLFMIWNSEREIMYKHIIDATKAFDGKYLIGKGSQGCVYKAELPTGEVVAVKKLHSMSDGEISNLKAMTAEIQALTEIKHRNIVKLYGFCSNPRFSFLVYEFLEGGNLSIILKNQNQASKLDWMKRVNIVKGVANALSYMHHGCSLPIVHRDISSKNVVLDSEFKEVRVIDFGTTKFLMPDSNNITEFAGTFTYAAPEIAYTMKVDEKCDVYSFGVLTLEIIIGEHPGELISSLVGTSTAYNLPLKVVLDQRLPHPTKSTVEEVISIAKVAFACLSENPPSRPTMEQVSNELLMSISQLDDALSFHTITLGQLMKI 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1734 965 SUPERFAMILY Protein kinase-like (PK-like) 650 941 IPR011009 -
Sto9g1734 965 SMART LRR_typ_2 525 548 IPR003591 -
Sto9g1734 965 SMART LRR_typ_2 212 236 IPR003591 -
Sto9g1734 965 SMART LRR_typ_2 549 574 IPR003591 -
Sto9g1734 965 SMART LRR_typ_2 140 163 IPR003591 -
Sto9g1734 965 SMART LRR_typ_2 164 188 IPR003591 -
Sto9g1734 965 SMART LRR_typ_2 452 476 IPR003591 -
Sto9g1734 965 SMART LRR_typ_2 477 501 IPR003591 -
Sto9g1734 965 SMART LRR_typ_2 405 428 IPR003591 -
Sto9g1734 965 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Sto9g1734 965 Gene3D Phosphorylase Kinase; domain 1 634 751 - -
Sto9g1734 965 Pfam Leucine rich repeat 455 514 IPR001611 GO:0005515
Sto9g1734 965 Pfam Leucine rich repeat 382 441 IPR001611 GO:0005515
Sto9g1734 965 Pfam Leucine rich repeat 520 562 IPR001611 GO:0005515
Sto9g1734 965 Gene3D Ribonuclease Inhibitor 292 598 IPR032675 -
Sto9g1734 965 ProSitePatterns Tyrosine protein kinases specific active-site signature. 797 809 IPR008266 GO:0004672|GO:0006468
Sto9g1734 965 SUPERFAMILY RNI-like 253 569 - -
Sto9g1734 965 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 146 963 - -
Sto9g1734 965 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 15 165 - -
Sto9g1734 965 ProSiteProfiles Leucine-rich repeat profile. 406 429 IPR001611 GO:0005515
Sto9g1734 965 PRINTS Leucine-rich repeat signature 407 420 - -
Sto9g1734 965 PRINTS Leucine-rich repeat signature 525 538 - -
Sto9g1734 965 Gene3D Ribonuclease Inhibitor 23 181 IPR032675 -
Sto9g1734 965 Gene3D Ribonuclease Inhibitor 182 283 IPR032675 -
Sto9g1734 965 Pfam Protein kinase domain 678 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g1734 965 SUPERFAMILY L domain-like 50 326 - -
Sto9g1734 965 Gene3D Transferase(Phosphotransferase) domain 1 752 954 - -
Sto9g1734 965 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 15 165 - -
Sto9g1734 965 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 146 963 - -
Sto9g1734 965 ProSiteProfiles Protein kinase domain profile. 673 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1734 Sto-Chr9 21800951 21803930 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1734 4 846 Receptor kinase-like Gene Family AT4G08850 41.119 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto9g1734 Pkinase 1.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1734 - - gmx:100800924 930.243