Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1729 ATGCCAGATGGGGAAGTTACTAATCTGAAGGCCTTAACGAGTGAGATCCGAGCCTTGACGGAAGCCAAACATCGTAACATTGTTCGGCTATACGGGTTTTGTTCCAACTCCCAATTCTCATTTTTGGTTTATGAGTTCTTGGAAGGTGGCAGCTTGTATAGCATTctgagaaatgaaaatgaagcaAGTAGGCTTGAGTGGAACAAAAGGGCCAACATTGTAAAAGGTTTGGCAAATGCATTATCCCACATGCATCATGGCTGCTCAATTCCTATAGTTCATCGTGACGTATCAAGCAAGAATGTTCTTCTGGATTCAGAATACCAGGAGGCTCACATTGCTGACTTTGGAACAGCTAAGTTTTTGAAGTCTGACTCTTCCAATATCACCTTGTTTGCTGGCACTTTTGGCTATGCCGCTCCAGAGATGGCTTACTTTATGGAAGCAAATGAGAAATGCGATGTGTATAGTTTTGGAGTTCTGAGTTTGGAAATCGTTATGGGAGAGCATCCGGGGGAACTCATTTCTTCGTTGGCAGAGACTTCCACGAATTATAATATGCTATTGAAAGATTTATTAGACCCACGACTCTCTCAACCCACGAATCCAATTGTTGAAGAGGTGGTTTTAATTGCAGAAATAGCATTCTCTTGCATGAGAGAAAATCCACAATCTCGTCCGACCATGGAACAAGTATCTATGAAGCTTATGAATCCAAAATCAAATTTAGGAGAGCAGTTTCCTACCATCACAGTTGGACAACTTGTGAAGGATTGA 777 0.408 MPDGEVTNLKALTSEIRALTEAKHRNIVRLYGFCSNSQFSFLVYEFLEGGSLYSILRNENEASRLEWNKRANIVKGLANALSHMHHGCSIPIVHRDVSSKNVLLDSEYQEAHIADFGTAKFLKSDSSNITLFAGTFGYAAPEMAYFMEANEKCDVYSFGVLSLEIVMGEHPGELISSLAETSTNYNMLLKDLLDPRLSQPTNPIVEEVVLIAEIAFSCMRENPQSRPTMEQVSMKLMNPKSNLGEQFPTITVGQLVKD 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1729 258 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 2 255 - -
Sto9g1729 258 Gene3D Phosphorylase Kinase; domain 1 2 50 - -
Sto9g1729 258 Pfam Protein kinase domain 10 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g1729 258 Gene3D Transferase(Phosphotransferase) domain 1 51 248 - -
Sto9g1729 258 ProSitePatterns Tyrosine protein kinases specific active-site signature. 92 104 IPR008266 GO:0004672|GO:0006468
Sto9g1729 258 SUPERFAMILY Protein kinase-like (PK-like) 9 234 IPR011009 -
Sto9g1729 258 PIRSF ILK 5 247 - -
Sto9g1729 258 PANTHER LRR RECEPTOR-LIKE KINASE 2 255 - -
Sto9g1729 258 ProSiteProfiles Protein kinase domain profile. 1 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1729 Sto-Chr9 21704172 21707504 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1729 1 232 Receptor kinase-like Gene Family AT5G65700 41.961 3.69e-52 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto9g1729 Pkinase 1.6e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1729 - - gmx:100814634 332.798