Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1728 ATGAGTTCCACTCACTTTCCACCATTTTGGTGCATATTCTTCTCTTGTGTCATCTTTGTATTCCTTTCTTCAAATCAAGCTTATTCTTCCTTGGCATATTCTTCTTCAAAACATAGTGAAGCAAGTGCTCTACTGAAGTGGAAAGCAAGCTTTGACAAAGAAAGCCAACTTAACCTTTCTTCTTGGAAGAATGGCACCGATCCTTGCAATGGTTGGAAAAGAATCACATGCGATGATCAATCCATGTTCATTTCCATGGTAAATCTTTCCAATCTTGAGATAAAAGGTACACTTCACACTCTCAACTTCTCATCCTTCCCTAACCTCAAGGTTTTAGACATAACCAACAATTGGTTCTATGGAACCATTCCTCCCCAAATTGGGAACTTGTCAAGCATTCTCACTTTGAATTTGGGTTATAATGATTTGGTTGGCTCCATTCCTCAAGGAATAGGGGCTTTGAGGAATCTAAGTCGTCTTGACCTTTCTAATTGCTACCTTGTTGGGTCCATtcccaagcaagttgggaatTTGAAGCATCTGAAAGATCTAGTACTTAATGACAATGAATTCTCTGGTTTCATTCCGCAAGAAATCGGAATGCTCAGTAATCTTGTGCAGCTTGAGTTGTCAACAAATGCTTTCACCGGTGGAATCCCTTCTACAATAGGAAATCTGAGCAAGTTAGAATTACTTTATCTCTATGACAACAATCTCACTGGTCACATTCCTAAGGAGATTGGGAAACTCTCTTCTCTCAATACTTTTCATTTGACATCCAATCAAGTGAGTGGGTCTATTCCACCCTCCATAGGGAACTTGACAAAGCTCACTTCATTGCTTTTGGAGAGCAATAGACTTTCAGGACCAATTCCTTCCTCCATTGGGAATTTGGTCAATCTAACACAACTTCTCCTTGGAGAAAACTCCCTTTCTGGACCAATTCCTTCCTCTATAGGGAATTTGACAAAGCTCACCAACCTGCATTTGAATGTGAACAAACTCAGCGGCAGAATTCCACCAGAAATGAATAGCCTTACCCATTGGAAGAACTTGCAGCTCTGTGGCAATGATTTCACTGGTCATTTGCCACAAGACATCTGTGCTGGTGGCAAATTAGTAAGCTTTACTGCTTGTGAGAACCGTTTCGCCGGTCCAATCCCGAGAAGCTTGAAGAATTGCTCCACCCTTGTTAGACTTAGGCTTGATGGTAACCAGTTGGATGGAAATATAACAAATGATTTTGATGTATATCCATCTTTGGCCTACATTGACCTAAGTCATAATAAGTTGTATGGCCACCTCTCATCAAAATGGGGGCAGTGTCATAATCTCACAAGTCTTCAGATTTCCAACAATAATATCTCTGGAGGTATACCACCACAACTTCCGGAGGCGACGAAATTGAAGCGTCTTGATCTCTCTTCAAATCAATTTACAGGAGAAATCCCCAAGGAGATAGGGAGGTTAAGCTCACTACTTTACCTTGATCTAAGCAACAATCATCTTTCAGGCAATGTTTCCAAGGAAATAGGTAAAATGAAGCAGCTTGAACAATTGGAACTCGCAGCTAATAATTTGAGTGGCTTAATTGCAGCACAACTTGGAGGATTGACCAAACTATTGAAGCTGAATTTgagaaataataaattcaaggGAAGCATACCCTCTGAGCTTGGCAAATTACGGGCTCTTGGATATCTTGATCTTAGTGGGAATTTTCTCAACAACAAAATACCAGCAACACTTGGGGCTTTGAAAAGTTTGGAGTTTCTGAACCTCTCACATAATAACCTCTCCAGCACAATTCCATCTAGTCTTGCAGATATGATAAGCTTGACATCTGTTGACATATCTTACAACCAATTAGAAGGTCCTCTTCCAAGCAATCCCGTCTTTCGTCACATTTCATTCGAATCCGTGAGGGACAATGCAGGTTTGTGTGGTAATGTTTCCGGCTTGGCTTCTTGCAATGAATTGAGTATTGAACCTTTTGGTCATAGCAGCAGAAAAACCAAGATTTTAATATTGTCCCTCACCTTAGGCATGGTAATGATAGTGATGATTGGAGCTTTTTGCATTGTTTGTTTCTATGTAAGAAGGAGAAAAAACAAGGTTAAGGAAGCACATATTGATCCAGATTTCTTTGTCATATGGAGTTCTGATATAGAAATTATGTACGAAAACATCATCGAGGCCACAAAGGATTTTGAGGACTCATATCTGATCGGGAAAGGGGCACAAGGAAGTGTTTATAAGGCTGTGTTGCCCAAAGGTCTAGTTGTTGCAGTGAAGAAGCTTCATTCAATGCCAGATGGGGAAGTTACTAATTTGAAAGCCTTGACGAGTGAGATCCGAGCCTTGACGGAAGCCAAACACCGTAACATTGTCCGGCTGTACGGGTTTTGTTCGAACTCGCAATTCTCATTTTTGGTTTATGAGTTCTTGGAAGGTGGCAGCTTGTATGATATTctgagaaatgaaaatgaagcaAGTAGGCTTGGGTGGAACAAAAGGGCCAACATTGTAAAAGGTTTGGCAAATGCATTATCCCACATGCATCATGGTTGCTCAATTCCTATACTTCATCGTGACGTATCAAGCAAGAATGTTCTTCTAGATTCCGAATACCAGGAGGCTCACATTGCTGACTTTGGAACAGCTAAGTTTTTGAAGTCTGACTCAACCAATATCACCATGTTTGCTGGCACTTTTGGCTATGCTGCTCCAGAGATGGCTTACTTTATGGAAGCAAATGAGAAATGCGATGTGTATAGTTTTGGAGTTCTGAGTTTGGAAATCATTATGGGAGAGCATCCGGGGGAACTCATTTCTTCGTTGGCAGAGACTTGCACGAATTATAATATGTTGTTGAAAGATTTGTTAGACACTTAG 2895 0.3993 MSSTHFPPFWCIFFSCVIFVFLSSNQAYSSLAYSSSKHSEASALLKWKASFDKESQLNLSSWKNGTDPCNGWKRITCDDQSMFISMVNLSNLEIKGTLHTLNFSSFPNLKVLDITNNWFYGTIPPQIGNLSSILTLNLGYNDLVGSIPQGIGALRNLSRLDLSNCYLVGSIPKQVGNLKHLKDLVLNDNEFSGFIPQEIGMLSNLVQLELSTNAFTGGIPSTIGNLSKLELLYLYDNNLTGHIPKEIGKLSSLNTFHLTSNQVSGSIPPSIGNLTKLTSLLLESNRLSGPIPSSIGNLVNLTQLLLGENSLSGPIPSSIGNLTKLTNLHLNVNKLSGRIPPEMNSLTHWKNLQLCGNDFTGHLPQDICAGGKLVSFTACENRFAGPIPRSLKNCSTLVRLRLDGNQLDGNITNDFDVYPSLAYIDLSHNKLYGHLSSKWGQCHNLTSLQISNNNISGGIPPQLPEATKLKRLDLSSNQFTGEIPKEIGRLSSLLYLDLSNNHLSGNVSKEIGKMKQLEQLELAANNLSGLIAAQLGGLTKLLKLNLRNNKFKGSIPSELGKLRALGYLDLSGNFLNNKIPATLGALKSLEFLNLSHNNLSSTIPSSLADMISLTSVDISYNQLEGPLPSNPVFRHISFESVRDNAGLCGNVSGLASCNELSIEPFGHSSRKTKILILSLTLGMVMIVMIGAFCIVCFYVRRRKNKVKEAHIDPDFFVIWSSDIEIMYENIIEATKDFEDSYLIGKGAQGSVYKAVLPKGLVVAVKKLHSMPDGEVTNLKALTSEIRALTEAKHRNIVRLYGFCSNSQFSFLVYEFLEGGSLYDILRNENEASRLGWNKRANIVKGLANALSHMHHGCSIPILHRDVSSKNVLLDSEYQEAHIADFGTAKFLKSDSTNITMFAGTFGYAAPEMAYFMEANEKCDVYSFGVLSLEIIMGEHPGELISSLAETCTNYNMLLKDLLDT 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1728 964 SUPERFAMILY RNI-like 306 628 - -
Sto9g1728 964 Gene3D Ribonuclease Inhibitor 36 190 IPR032675 -
Sto9g1728 964 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 121 244 - -
Sto9g1728 964 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 19 146 - -
Sto9g1728 964 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 228 962 - -
Sto9g1728 964 Gene3D Ribonuclease Inhibitor 249 331 IPR032675 -
Sto9g1728 964 Gene3D Transferase(Phosphotransferase) domain 1 816 962 - -
Sto9g1728 964 PRINTS Leucine-rich repeat signature 493 506 - -
Sto9g1728 964 PRINTS Leucine-rich repeat signature 586 599 - -
Sto9g1728 964 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 228 962 - -
Sto9g1728 964 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 19 146 - -
Sto9g1728 964 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 121 244 - -
Sto9g1728 964 Pfam Leucine rich repeat 444 503 IPR001611 GO:0005515
Sto9g1728 964 Pfam Leucine rich repeat 155 214 IPR001611 GO:0005515
Sto9g1728 964 Pfam Leucine rich repeat 516 573 IPR001611 GO:0005515
Sto9g1728 964 Gene3D Ribonuclease Inhibitor 333 434 IPR032675 -
Sto9g1728 964 SUPERFAMILY RNI-like 106 407 - -
Sto9g1728 964 Gene3D Ribonuclease Inhibitor 191 248 IPR032675 -
Sto9g1728 964 Gene3D Ribonuclease Inhibitor 435 529 IPR032675 -
Sto9g1728 964 Gene3D Ribonuclease Inhibitor 530 657 IPR032675 -
Sto9g1728 964 ProSiteProfiles Protein kinase domain profile. 737 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g1728 964 Gene3D Phosphorylase Kinase; domain 1 698 815 - -
Sto9g1728 964 SMART LRR_typ_2 106 130 IPR003591 -
Sto9g1728 964 SMART LRR_typ_2 322 346 IPR003591 -
Sto9g1728 964 SMART LRR_typ_2 274 298 IPR003591 -
Sto9g1728 964 SMART LRR_typ_2 490 514 IPR003591 -
Sto9g1728 964 SMART LRR_typ_2 226 250 IPR003591 -
Sto9g1728 964 SMART LRR_typ_2 538 562 IPR003591 -
Sto9g1728 964 SMART LRR_typ_2 586 610 IPR003591 -
Sto9g1728 964 SMART LRR_typ_2 154 178 IPR003591 -
Sto9g1728 964 Pfam Protein kinase domain 738 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g1728 964 SUPERFAMILY Protein kinase-like (PK-like) 718 945 IPR011009 -
Sto9g1728 964 ProSiteProfiles Leucine-rich repeat profile. 588 609 IPR001611 GO:0005515
Sto9g1728 964 ProSitePatterns Tyrosine protein kinases specific active-site signature. 861 873 IPR008266 GO:0004672|GO:0006468
Sto9g1728 964 Pfam Leucine rich repeat N-terminal domain 39 78 IPR013210 -
Sto9g1728 964 Pfam Leucine Rich Repeat 588 607 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1728 Sto-Chr9 21695576 21698552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1728 35 910 Receptor kinase-like Gene Family AT4G08850 43.593 0.0 703
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto9g1728 Pkinase 6.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1728 - - gmx:100811066 927.161