Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1712 ATGGATTCTCCTCCCGAAAATTCACCATCTCTTCCCTCCGGCGTCGACGCCGATGACCACCACAACACTCTTCTAAAACCAAAGAAGCACGCCGGCAGGCCAAAGGGTTCCAAGAACAAGCCGAAGCCGCAACCATTGATCATAACCAACAATGTATCGTGGAAAGCCGATGACATCGATGTCATCAACGTCCCTTCTAGCGTTGACTTAATAGGGTGGTTATGTCAGTACTCATTGTCCATCCGTCACCCTTTTGGTTGTTCTCAACCCTCTTTATTTGTACCTGGACCCGTACCCGTGATGTCTCTCTCCGGTTCTATTACAACTGATGTcacgtcgtcgtcgtcgtctcaTTCGTTAGTTATTTGTGTTCCAGGGTGTCAAGGACAAATAGTTTATGGACTCATTGGCGGAAGTGTTATAGCTACGGGCACTGTAACAATAGTGATAGTGGTTGAAGATAACAAAACAAATAGAGTTTAG 483 0.4369 MDSPPENSPSLPSGVDADDHHNTLLKPKKHAGRPKGSKNKPKPQPLIITNNVSWKADDIDVINVPSSVDLIGWLCQYSLSIRHPFGCSQPSLFVPGPVPVMSLSGSITTDVTSSSSSHSLVICVPGCQGQIVYGLIGGSVIATGTVTIVIVVEDNKTNRV 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1712 160 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 81 152 IPR014476 GO:0003680
Sto9g1712 160 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 21 77 IPR014476 GO:0003680
Sto9g1712 160 MobiDBLite consensus disorder prediction 1 46 - -
Sto9g1712 160 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 81 152 - -
Sto9g1712 160 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 21 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1712 Sto-Chr9 21510459 21510995 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1712 6 152 AT-hook Motif Nuclear Localized (AHL) Family AT3G60870 27.879 6.12e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1712 - - qsu:111988888 56.225