Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1711 ATGGCTCCTCCTTCTAAAAATTCACCATCTCTTTCCTCCGATGCCGACCACTACCTACAACCAAAGAAGCAGCGAGGTAGGCCGAAAGGTTCCAAGAACAAGACCACCAAGTCACACCCCCAATTATTTTCTCCCAACAATCCATCTTTGAAAGACTCCATCGACGTCGTCCACGTCCCGCCCGGCGCCGACGTAATATCGCGGTTGTCTCGGTACTCGTGCAGCCGACAAAAGAGCATCACCGTGTTATCTGCCTCTGGATTGGTCTCCCAACTCTccgttcttcctcttcttacttatTATCCGGACATCGTATCCGTACCCGGACCTGTACCCGTGCTGTCTCTCTCCGGTTCTGTCCCGCTTGAGATGACATCATCATCGCGGGCGTTTCATTCGTTAACTATTTGTGTTCCGGGATGTGAAGGACAAATAGTTTATGGACTCATTGGAGGAAGTGTTGTAGCTACAAGCATTGTGACGATAGTGATAGTGGCCACAGAGTGTGAGATTGATAAGGATGAAGATAATAAAATAGAGTTTATCAATAACATGATGGTAGGGAATGAGCATGATTTTGTGGTTCGTCCTGATTTTGCTCTAGACTCTGGCTTATCCCTTGGCATAACAATTATGtttatttaa 645 0.4512 MAPPSKNSPSLSSDADHYLQPKKQRGRPKGSKNKTTKSHPQLFSPNNPSLKDSIDVVHVPPGADVISRLSRYSCSRQKSITVLSASGLVSQLSVLPLLTYYPDIVSVPGPVPVLSLSGSVPLEMTSSSRAFHSLTICVPGCEGQIVYGLIGGSVVATSIVTIVIVATECEIDKDEDNKIEFINNMMVGNEHDFVVRPDFALDSGLSLGITIMFI 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1711 214 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 5 164 - -
Sto9g1711 214 SUPERFAMILY AF0104/ALDC/Ptd012-like 56 169 - -
Sto9g1711 214 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 5 164 IPR014476 GO:0003680
Sto9g1711 214 CDD DUF296 56 169 IPR005175 -
Sto9g1711 214 ProSiteProfiles PPC domain profile profile. 48 189 IPR005175 -
Sto9g1711 214 MobiDBLite consensus disorder prediction 35 51 - -
Sto9g1711 214 MobiDBLite consensus disorder prediction 1 54 - -
Sto9g1711 214 MobiDBLite consensus disorder prediction 1 17 - -
Sto9g1711 214 Gene3D - 54 190 - -
Sto9g1711 214 Pfam Plants and Prokaryotes Conserved (PCC) domain 56 166 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1711 Sto-Chr9 21507383 21508301 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1711 21 163 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 29.655 8.75e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1711 - - aprc:113857467 77.4109