Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g1710 ATGGCTCCTCCTTCCAAAAATTCACCATCTCTTTCCTCCGACGCCGACCACTACCTACAACCAAAGAAGCAGCGAGGTAGGCCGAAAGGTTCCAAGAACAAGACCACCAAGTCACACCCCCAATTATTTTCTCCCAACAATCCATCTTTGAAAGACTCCATCGACGTCGTCCACGTCCCGCCCGGCGCCGACGTAATATCGCGGTTGTCTCGGTACTCGTGCAGCCGACAAAAGAGCATCACCGTGTTATCTGCCTCGGGATTGGTCTCCCAACTCTccgttcttcctcttcttacttatTATCCGGACATCATATCCGTACCCGGACCTGTACCCGTGCTGTCTCTCTCCGGCTCTATCCCGCTCGAGATGACATCATCGTCGCCGCGGGCGTTTAATTGGTTGACTATTTGTGTTCCGGGGTGTGAAGGACAAATAGTTTATGGACTCATTGGAGGAAGTGTTGTAGCTACAAGCATTGTGACGATAGTATTAATGGCCACAGAATGTGAGAGTGATAAGGAAGAAGATAACAAAATAGAGTTTAATAATGAGATGATGGTTGGGAATAAACCGAATGCTATTACTATTTCGACGACGAATGAGGTTGAAGATTATGTGGTTCGTCCTGATTTTGCTCTAGAGTCTAGCTTATCCATTAGTGATTACGGGTGGAATCTGTTGTTTGTCTTCAACATCTTCAATTTCAAATCTCGCTATCTTCAATTTCAAATCATATAG 741 0.4467 MAPPSKNSPSLSSDADHYLQPKKQRGRPKGSKNKTTKSHPQLFSPNNPSLKDSIDVVHVPPGADVISRLSRYSCSRQKSITVLSASGLVSQLSVLPLLTYYPDIISVPGPVPVLSLSGSIPLEMTSSSPRAFNWLTICVPGCEGQIVYGLIGGSVVATSIVTIVLMATECESDKEEDNKIEFNNEMMVGNKPNAITISTTNEVEDYVVRPDFALESSLSISDYGWNLLFVFNIFNFKSRYLQFQII 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g1710 246 SUPERFAMILY AF0104/ALDC/Ptd012-like 56 181 - -
Sto9g1710 246 ProSiteProfiles PPC domain profile profile. 48 189 IPR005175 -
Sto9g1710 246 MobiDBLite consensus disorder prediction 35 51 - -
Sto9g1710 246 MobiDBLite consensus disorder prediction 1 54 - -
Sto9g1710 246 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 5 167 - -
Sto9g1710 246 MobiDBLite consensus disorder prediction 1 17 - -
Sto9g1710 246 Pfam Plants and Prokaryotes Conserved (PCC) domain 56 167 IPR005175 -
Sto9g1710 246 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 5 167 IPR014476 GO:0003680
Sto9g1710 246 CDD DUF296 56 170 IPR005175 -
Sto9g1710 246 Gene3D - 54 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g1710 Sto-Chr9 21499815 21500703 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g1710 22 164 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 30.137 9.19e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g1710 - - aprc:113857467 98.9821